Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k03
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070984-1|AAL48606.1|  224|Drosophila melanogaster RE07960p pro...    80   3e-15
AE014296-2486|AAN11795.1|  224|Drosophila melanogaster CG32147-P...    80   3e-15
AY071510-1|AAL49132.1|  916|Drosophila melanogaster RE56564p pro...    30   3.0  
AE014298-760|AAF46050.1|  916|Drosophila melanogaster CG11473-PA...    30   3.0  
BT011359-1|AAR96151.1|  636|Drosophila melanogaster RE68639p pro...    29   5.3  

>AY070984-1|AAL48606.1|  224|Drosophila melanogaster RE07960p
           protein.
          Length = 224

 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
 Frame = +3

Query: 183 KPIIMVTGFGPFANHP-VNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPAL 359
           + +I+V+GFGPF  H  VNASWEAVKLL +    +    +L    + V Y  VDE V  +
Sbjct: 6   RKLIVVSGFGPFLGHEAVNASWEAVKLLPEILTHDGIEYDLEKRLVSVEYGAVDEAVAEI 65

Query: 360 WETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADG---AVRIHT 530
           W+   P L+IHVGVS +A  + +E  A+   ++R D  DK  AN  C       A  + T
Sbjct: 66  WKRQ-PYLVIHVGVSGVAKCVYIEKLAYNHKFRRADNCDKKLANGTCELPNNGHANVLKT 124

Query: 531 KLNVERICKEFND 569
           +L+V++I    N+
Sbjct: 125 ELDVDKIVAVVNE 137


>AE014296-2486|AAN11795.1|  224|Drosophila melanogaster CG32147-PA
           protein.
          Length = 224

 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
 Frame = +3

Query: 183 KPIIMVTGFGPFANHP-VNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPAL 359
           + +I+V+GFGPF  H  VNASWEAVKLL +    +    +L    + V Y  VDE V  +
Sbjct: 6   RKLIVVSGFGPFLGHEAVNASWEAVKLLPEILTHDGIEYDLEKRLVSVEYGAVDEAVAEI 65

Query: 360 WETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADG---AVRIHT 530
           W+   P L+IHVGVS +A  + +E  A+   ++R D  DK  AN  C       A  + T
Sbjct: 66  WKRQ-PYLVIHVGVSGVAKCVYIEKLAYNHKFRRADNCDKKLANGTCELPNNGHANVLKT 124

Query: 531 KLNVERICKEFND 569
           +L+V++I    N+
Sbjct: 125 ELDVDKIVAVVNE 137


>AY071510-1|AAL49132.1|  916|Drosophila melanogaster RE56564p
           protein.
          Length = 916

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 543 ERICKEFNDASPEDSTRAVSSKDAGSATAGAVWK 644
           E+  K+  +A P DS  A  SKD+G A  GA ++
Sbjct: 139 EKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQ 172


>AE014298-760|AAF46050.1|  916|Drosophila melanogaster CG11473-PA
           protein.
          Length = 916

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 543 ERICKEFNDASPEDSTRAVSSKDAGSATAGAVWK 644
           E+  K+  +A P DS  A  SKD+G A  GA ++
Sbjct: 139 EKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQ 172


>BT011359-1|AAR96151.1|  636|Drosophila melanogaster RE68639p
           protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
 Frame = -1

Query: 766 WTNQCTAIIHGQRCVVDVLTQISDALTQRICCVILLLCTLDFQTAPAVALPASLELTALV 587
           W N    +   +R  +    +I +  TQ++C V  L  T    T P   +    E  AL 
Sbjct: 181 WWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTGP---VKEFWERRALQ 237

Query: 586 ESSGLASLNSL--HILSTLSLVWIL 518
            S G+  + ++   +  TL LVWIL
Sbjct: 238 ISHGIEEIGNIRWELAGTLLLVWIL 262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,556,322
Number of Sequences: 53049
Number of extensions: 702989
Number of successful extensions: 1808
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1804
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)