Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k01
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.84 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -3

Query: 214 YIDALQLQVRVSMVGTGGV---DAVLVGDDLPELSSN 113
           +++ALQ    +SM+G  GV    A LV D +  +S N
Sbjct: 111 FMEALQAGADISMIGQFGVGFYSAYLVADKVTVVSKN 147


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 107  NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 229
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 654  QTKHTASTTRLYTTSASAL 710
            QTK T STT   TT+ S L
Sbjct: 1184 QTKTTTSTTTRPTTTVSQL 1202


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 657 TKHTASTTRLYTTSASALSNCP 722
           +K + STT   TT++SAL++ P
Sbjct: 4   SKFSPSTTTTTTTTSSALNSTP 25


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 657 TKHTASTTRLYTTSASALSNCP 722
           +K + STT   TT++SAL++ P
Sbjct: 4   SKFSPSTTTTTTTTSSALNSTP 25


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 328 RTEDLSERSGADRVHGAGLQVDEDGAG 248
           +  DLS R+G+   H   L + + G G
Sbjct: 196 KARDLSPRNGSPTDHSPVLNLSKSGGG 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,237
Number of Sequences: 336
Number of extensions: 3582
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)