Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5j21
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   1.8  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    24   4.3  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   7.4  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    23   9.8  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = -2

Query: 321 LSPFLSNRLS*NPKNLXVHRIRKSGTKF*HPCLFHPVMXGNPSYXYQR 178
           + P L   L+ N ++    + + S T   HP  +HP    + S   Q+
Sbjct: 293 MKPMLQRHLTRNKRSQPARKRKSSKTDHRHPFQYHPTYDQHKSCRIQQ 340


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 551 EHCYFWYALSGRYQHSA*QIVVTIA 477
           +H    +AL   YQHSA  IV TIA
Sbjct: 44  QHVGSVHALPAIYQHSAPAIVKTIA 68


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 329 LNISRHFYPIVYREIRRIXEFIVFVNPVQNFNIRV 225
           +NI   FY ++   + ++   +V +N   NF I V
Sbjct: 330 INIVEAFYSLIIEYMVKVSNLLVTINSSVNFFIYV 364


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 587 FHSSSPKEFCSKEHCYFWYALSGRYQHSA*QIVVTIA 477
           +  S+P  +       + ++    YQHSA  IV TIA
Sbjct: 64  YQHSAPAIYQHSAPAIYQHSAPAIYQHSAPAIVKTIA 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,737
Number of Sequences: 2352
Number of extensions: 12544
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)