Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5j21
         (595 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035836-1|AAH35836.1|  439|Homo sapiens LOC374569 protein protein.   166   5e-41
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei...    31   4.1  
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.     31   4.1  

>BC035836-1|AAH35836.1|  439|Homo sapiens LOC374569 protein protein.
          Length = 439

 Score =  166 bits (404), Expect = 5e-41
 Identities = 90/186 (48%), Positives = 117/186 (62%)
 Frame = +3

Query: 36  KRVLVLYXGXTFGMLKNEKGVLVPQKDIESVIXKLPQLHDDAYWKNXLAGTDKKDYLXLP 215
           +R+L +Y G T GM ++E GVLVP   + +++  LP  HD+ + +   A    +D L LP
Sbjct: 9   RRLLAVYTGGTIGM-RSELGVLVPGTGLAAILRTLPMFHDEEHAR---ARGLSEDTLVLP 64

Query: 216 DGKDTDVKILYRIYEYDELXDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 395
                  +ILY + E   L DSSD TI +W+ +A+ IKR Y  Y GFVV+HGTDT A+  
Sbjct: 65  PASRNQ-RILYTVLECQPLFDSSDMTIAEWVCLAQTIKRHYEQYHGFVVIHGTDTMAFAA 123

Query: 396 SXLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 575
           S LSFMLE + KTV+LTGAQVPI    SDG  NLL A+L+A    IPEV +FF  +LFRG
Sbjct: 124 SMLSFMLENLQKTVILTGAQVPIHALWSDGRENLLGALLMAGQYVIPEVCLFFQNQLFRG 183

Query: 576 TRVKKV 593
            R  KV
Sbjct: 184 NRATKV 189


>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
           protein.
          Length = 1287

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +3

Query: 102 VPQKDIESVIXKLPQLHDDAYWKNXLAGTDKKDYLXLPDGKDTDVKILYRIYEYDELXDS 281
           V  K I S +  L  +H+  Y        D +D   + DG+DT V  L R   YD   D+
Sbjct: 141 VTSKQICSAMQTLYHMHNAEYDVLHAPPADDRDQSSMEDGEDTPVTKLQRFNSYDISRDT 200


>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
          Length = 1359

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +3

Query: 102 VPQKDIESVIXKLPQLHDDAYWKNXLAGTDKKDYLXLPDGKDTDVKILYRIYEYDELXDS 281
           V  K I S +  L  +H+  Y        D +D   + DG+DT V  L R   YD   D+
Sbjct: 213 VTSKQICSAMQTLYHMHNAEYDVLHAPPADDRDQSSMEDGEDTPVTKLQRFNSYDISRDT 272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,994,229
Number of Sequences: 237096
Number of extensions: 1683914
Number of successful extensions: 3057
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3056
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)