Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5j21
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical p...   172   2e-43
Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical p...   172   2e-43
Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical pr...   172   2e-43
Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical pr...   172   2e-43
AF016449-7|AAG24000.2|  350|Caenorhabditis elegans Hypothetical ...    30   1.1  
Z92782-8|CAB07185.1|  197|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z78061-2|CAB01493.1|  474|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z19555-6|CAJ15163.1|  187|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical
           protein C27A7.5e protein.
          Length = 684

 Score =  172 bits (418), Expect = 2e-43
 Identities = 88/186 (47%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
 Frame = +3

Query: 39  RVLVLYXGXTFGMLKNEKGVLVPQKD-IESVIXKLPQLHDDAYWKNXLAGTDKKDYLXLP 215
           RVLVLY G T GM K   GV  P    +  V+  +P L+D  Y +   +    + Y  LP
Sbjct: 92  RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 149

Query: 216 DGKDTDVKILYRIYEYDELXDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 395
             ++   +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY  
Sbjct: 150 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 209

Query: 396 SXLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 575
           S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    IPEV V+F  KL RG
Sbjct: 210 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 269

Query: 576 TRVKKV 593
            R  K+
Sbjct: 270 NRTVKL 275


>Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical
           protein C27A7.5d protein.
          Length = 647

 Score =  172 bits (418), Expect = 2e-43
 Identities = 88/186 (47%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
 Frame = +3

Query: 39  RVLVLYXGXTFGMLKNEKGVLVPQKD-IESVIXKLPQLHDDAYWKNXLAGTDKKDYLXLP 215
           RVLVLY G T GM K   GV  P    +  V+  +P L+D  Y +   +    + Y  LP
Sbjct: 55  RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 112

Query: 216 DGKDTDVKILYRIYEYDELXDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 395
             ++   +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY  
Sbjct: 113 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 172

Query: 396 SXLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 575
           S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    IPEV V+F  KL RG
Sbjct: 173 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 232

Query: 576 TRVKKV 593
            R  K+
Sbjct: 233 NRTVKL 238


>Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical
           protein C27A7.5c protein.
          Length = 715

 Score =  172 bits (418), Expect = 2e-43
 Identities = 88/186 (47%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
 Frame = +3

Query: 39  RVLVLYXGXTFGMLKNEKGVLVPQKD-IESVIXKLPQLHDDAYWKNXLAGTDKKDYLXLP 215
           RVLVLY G T GM K   GV  P    +  V+  +P L+D  Y +   +    + Y  LP
Sbjct: 123 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 180

Query: 216 DGKDTDVKILYRIYEYDELXDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 395
             ++   +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY  
Sbjct: 181 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 240

Query: 396 SXLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 575
           S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    IPEV V+F  KL RG
Sbjct: 241 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 300

Query: 576 TRVKKV 593
            R  K+
Sbjct: 301 NRTVKL 306


>Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical
           protein C27A7.5a protein.
          Length = 713

 Score =  172 bits (418), Expect = 2e-43
 Identities = 88/186 (47%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
 Frame = +3

Query: 39  RVLVLYXGXTFGMLKNEKGVLVPQKD-IESVIXKLPQLHDDAYWKNXLAGTDKKDYLXLP 215
           RVLVLY G T GM K   GV  P    +  V+  +P L+D  Y +   +    + Y  LP
Sbjct: 121 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 178

Query: 216 DGKDTDVKILYRIYEYDELXDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 395
             ++   +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY  
Sbjct: 179 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 238

Query: 396 SXLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 575
           S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    IPEV V+F  KL RG
Sbjct: 239 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 298

Query: 576 TRVKKV 593
            R  K+
Sbjct: 299 NRTVKL 304


>AF016449-7|AAG24000.2|  350|Caenorhabditis elegans Hypothetical
           protein C50H11.13 protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 415 WKPSERLLYSLVLRFQYFNLEAMVTTICYALC 510
           W  S RLL+  V+      L  ++ T CY LC
Sbjct: 26  WTNSSRLLFYSVISISLLTLPILLLTFCYILC 57


>Z92782-8|CAB07185.1|  197|Caenorhabditis elegans Hypothetical
           protein F14F8.9 protein.
          Length = 197

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 434 SLSDGFQHERQXRTTVRSCVGAVQNHESIV-IMVKPLNISRHFYPIVYREIRRIXEFIVF 258
           +L       R+    +++C   +  H+ +V +++   N SRH  P++Y ++  I    + 
Sbjct: 111 TLGGALDFVREIEKALKNCKNKLIEHDEVVTLIIGKGNHSRHQVPVIYNKLIEIYSDRIS 170

Query: 257 VNPVQNFNIRVF 222
           V+ V+N   RVF
Sbjct: 171 VD-VKNTG-RVF 180


>Z78061-2|CAB01493.1|  474|Caenorhabditis elegans Hypothetical
           protein C48G7.2 protein.
          Length = 474

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = -3

Query: 575 SPKEFCSKEHCYFWYALSGRYQHSA*QIVVTIASRLKYWNLS---TSEYNSLSDGFQHER 405
           SP  F S       Y ++  Y ++   ++++++ + K  NL+      Y  LSD  +H  
Sbjct: 388 SPLTFRSLPLLIEHYCVNENY-YNLFSLIISVSRKKKSENLNFENRKNYKKLSDELEHRL 446

Query: 404 QXRTTVRSCVGAVQ 363
           Q  + +R+C    Q
Sbjct: 447 QLPSAIRACTTTKQ 460


>Z19555-6|CAJ15163.1|  187|Caenorhabditis elegans Hypothetical
           protein F02A9.7 protein.
          Length = 187

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = +3

Query: 231 DVKILYRIYEYDELXDSSDF----TIDDWIKMARDIKRFYHDYDGFVVL 365
           DV +    ++ D   +S+DF    T  DW+      K FYH  DGF+++
Sbjct: 55  DVPVERVEFQIDNFFNSTDFMPVTTNLDWVSHLN--KTFYHKGDGFMII 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,370,865
Number of Sequences: 27780
Number of extensions: 273967
Number of successful extensions: 604
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)