Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5j16
         (572 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50874-6|CAA90765.1|  759|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AC006742-5|AAF60496.1|  239|Caenorhabditis elegans Hypothetical ...    29   2.3  
AC006742-4|AAF60495.1|  239|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p...    28   4.1  
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p...    28   4.1  
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr...    28   4.1  
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.     28   4.1  
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch...    28   4.1  
Z77662-4|CAB01193.1|  248|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AL161712-21|CAC70129.2|  729|Caenorhabditis elegans Hypothetical...    27   9.5  
AL021503-3|CAA16423.1|  324|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z50874-6|CAA90765.1|  759|Caenorhabditis elegans Hypothetical
           protein R10E4.4 protein.
          Length = 759

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +3

Query: 405 NLSLMKNNYEDLEIKLSKF-SQELPKLEGQMEIL 503
           NL+ +KN  ED+E+KL KF  + LP LE   +I+
Sbjct: 73  NLNHLKNFDEDIEMKLRKFPGKVLPALEEAAKIV 106


>AC006742-5|AAF60496.1|  239|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.7 protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +3

Query: 330 EYHCHTCNTKCDLNGITRNI-NDISRNLSLMKNNYEDLEIKLSKFSQELP-KLEGQMEIL 503
           E H +  ++     G+ R + N + RN S MK    ++    +   Q +  K+E  M+++
Sbjct: 99  ELHDNFKSSDTKQQGLNRKLTNKMERNRSEMKQFKMEMMSSFNGLKQNMDTKMEEMMQLM 158

Query: 504 EALANTVETKDFGWNPNS 557
            AL   + ++    NP S
Sbjct: 159 RALIQDLTSQKLAQNPES 176


>AC006742-4|AAF60495.1|  239|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.3 protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +3

Query: 330 EYHCHTCNTKCDLNGITRNI-NDISRNLSLMKNNYEDLEIKLSKFSQELP-KLEGQMEIL 503
           E H +  ++     G+ R + N + RN S MK    ++    +   Q +  K+E  M+++
Sbjct: 99  ELHDNFKSSDTKQQGLNRKLTNKMERNRSEMKQFKMEMMSSFNGLKQNMDTKMEEMMQLM 158

Query: 504 EALANTVETKDFGWNPNS 557
            AL   + ++    NP S
Sbjct: 159 RALIQDLTSQKLAQNPES 176


>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
            protein F11C3.3 protein.
          Length = 1963

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 363  DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALAN 518
            +L    R + ++   +   K N+E L+  + K  Q+L   + Q+E  E LAN
Sbjct: 1848 NLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQVEEAEELAN 1899


>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
            F11C3.3 protein.
          Length = 1963

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 363  DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALAN 518
            +L    R + ++   +   K N+E L+  + K  Q+L   + Q+E  E LAN
Sbjct: 1848 NLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQVEEAEELAN 1899


>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
            protein R06C7.10 protein.
          Length = 1938

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 375  ITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEA-LANTVETK 533
            + +++ND +  LS  +    DLE +  K  QE+  L+  +E ++  LA ++E K
Sbjct: 922  VEKSLNDANDRLSEHEEKNADLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEEK 975


>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
            R06C7.10 protein.
          Length = 1938

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 375  ITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEA-LANTVETK 533
            + +++ND +  LS  +    DLE +  K  QE+  L+  +E ++  LA ++E K
Sbjct: 922  VEKSLNDANDRLSEHEEKNADLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEEK 975


>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
          Length = 1938

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 375  ITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEA-LANTVETK 533
            + +++ND +  LS  +    DLE +  K  QE+  L+  +E ++  LA ++E K
Sbjct: 922  VEKSLNDANDRLSEHEEKNADLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEEK 975


>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
            protein.
          Length = 1966

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 363  DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALAN 518
            +L    R + ++   +   K N+E L+  + K  Q+L   + Q+E  E LAN
Sbjct: 1851 NLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQVEEAEELAN 1902


>Z77662-4|CAB01193.1|  248|Caenorhabditis elegans Hypothetical
           protein F47B8.4 protein.
          Length = 248

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +3

Query: 402 RNLSLMKNNYEDLEIKLSKFSQELPKLEGQ---MEILEALANTVETKD 536
           +NL ++K   +  E  L+K + E+ K +GQ   +E +E L N +   D
Sbjct: 55  KNLQMLKTIIDSFEYTLNKIAFEISKAKGQNFFIEKVEKLINNLNPFD 102


>AL161712-21|CAC70129.2|  729|Caenorhabditis elegans Hypothetical
           protein Y66D12A.5 protein.
          Length = 729

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 432 EDLEIKLSKFSQELPKLEGQMEILEAL 512
           ED+  K+ +FSQ  PKL G ++ + AL
Sbjct: 632 EDICEKVRRFSQMYPKLSGNLDEIPAL 658


>AL021503-3|CAA16423.1|  324|Caenorhabditis elegans Hypothetical
           protein Y68A4A.6 protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +1

Query: 460 FLKSYLSLKDKWKYLKPWRTLWKQ 531
           FL   L++++ +KYL P+RTL+ Q
Sbjct: 115 FLLFLLAIRNTFKYLFPFRTLYSQ 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,394,079
Number of Sequences: 27780
Number of extensions: 236725
Number of successful extensions: 739
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)