Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5j12
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094659-1|AAM11012.1|  197|Drosophila melanogaster AT23634p pro...   105   6e-23
AE014297-2249|AAF55348.1|  197|Drosophila melanogaster CG10326-P...   105   6e-23
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy...    29   8.2  

>AY094659-1|AAM11012.1|  197|Drosophila melanogaster AT23634p
           protein.
          Length = 197

 Score =  105 bits (252), Expect = 6e-23
 Identities = 45/165 (27%), Positives = 93/165 (56%)
 Frame = +1

Query: 211 DQEQQVRKVKRTLEGWRVALLSLKSVILWEQQWHPCAIVGSMTIMYLLIWLLDLNTLASI 390
           DQ++ + K+K  LE +R A++    V+ WE+Q++   + G ++ +YL++W LDL+ +  +
Sbjct: 7   DQKRALNKLKHDLEPFRTAIVGAYGVLTWEKQYYAGVVFGVISCLYLVLWYLDLSLITLL 66

Query: 391 AIVGLILNFVDFMVPVICNQLYGSSSWTGQHEKTFEEICRSIVISYNKLVIYIHSFYSLR 570
           +++G+I   +++  P++   ++G  +W G  E  FE++C  +      LV++    ++ R
Sbjct: 67  SLLGVISILLNYAFPMVSRLIFGGVNWDGDQEAKFEDVCGQVCAVKGSLVVWYEYLFNER 126

Query: 571 DTSPFMYYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQ 705
            ++ F+   +S+  L  +AWI + INN+            WPG+Q
Sbjct: 127 KSTVFV-IVMSLG-LLAMAWIGAIINNLLLMYLATLLILMWPGLQ 169


>AE014297-2249|AAF55348.1|  197|Drosophila melanogaster CG10326-PA
           protein.
          Length = 197

 Score =  105 bits (252), Expect = 6e-23
 Identities = 45/165 (27%), Positives = 93/165 (56%)
 Frame = +1

Query: 211 DQEQQVRKVKRTLEGWRVALLSLKSVILWEQQWHPCAIVGSMTIMYLLIWLLDLNTLASI 390
           DQ++ + K+K  LE +R A++    V+ WE+Q++   + G ++ +YL++W LDL+ +  +
Sbjct: 7   DQKRALNKLKHDLEPFRTAIVGAYGVLTWEKQYYAGVVFGVISCLYLVLWYLDLSLITLL 66

Query: 391 AIVGLILNFVDFMVPVICNQLYGSSSWTGQHEKTFEEICRSIVISYNKLVIYIHSFYSLR 570
           +++G+I   +++  P++   ++G  +W G  E  FE++C  +      LV++    ++ R
Sbjct: 67  SLLGVISILLNYAFPMVSRLIFGGVNWDGDQEAKFEDVCGQVCAVKGSLVVWYEYLFNER 126

Query: 571 DTSPFMYYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQ 705
            ++ F+   +S+  L  +AWI + INN+            WPG+Q
Sbjct: 127 KSTVFV-IVMSLG-LLAMAWIGAIINNLLLMYLATLLILMWPGLQ 169


>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
            chain protein.
          Length = 4559

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 169  NFIAKMGEKSSTVQDQEQQVRKVKRTLEGWRV---ALLSLKSVILWEQ 303
            +F  ++ +KS   + + + + K+KR L+ WRV     +   S+ +W++
Sbjct: 1040 SFYDELQDKSELDKQRVEIMNKIKRALQAWRVHGKGFMEFSSLWIWDK 1087


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,730,637
Number of Sequences: 53049
Number of extensions: 620587
Number of successful extensions: 1921
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1919
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)