Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5j10
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY196479-1|AAO38861.1|  410|Drosophila melanogaster mitochondria...    30   3.7  
AY075225-1|AAL68092.1|  410|Drosophila melanogaster AT17625p pro...    30   3.7  
AE014134-2484|AAF53386.1|  410|Drosophila melanogaster CG18124-P...    30   3.7  
BT001869-1|AAN71639.1|  791|Drosophila melanogaster SD05152p pro...    29   6.5  
AE014297-3580|AAN14006.1|  791|Drosophila melanogaster CG31127-P...    29   6.5  
BT024993-1|ABE01223.1|  257|Drosophila melanogaster IP09932p pro...    29   8.6  
AM292552-1|CAL23476.1|  257|Drosophila melanogaster elongase pro...    29   8.6  
AE014297-1052|AAF54461.1|  257|Drosophila melanogaster CG16905-P...    29   8.6  

>AY196479-1|AAO38861.1|  410|Drosophila melanogaster mitochondrial
           transcription terminationfactor protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +1

Query: 463 LHCEKILFTHQYPNLKLPSRL--GNTLWKTNTATKVLPKLYLKEFNRSLEVTLKKMVS-- 630
           +HC + L   QY N   PSRL    TL         +P    +E      V L+ +    
Sbjct: 24  MHCSRRLLFSQYENRASPSRLTPSGTLGSNEAENDYVPYRQDRETGTKARVLLEALRERF 83

Query: 631 --TKAQMNRLIISDQLIN 678
             T A++ + IISD+L++
Sbjct: 84  RFTDAELQK-IISDELVH 100


>AY075225-1|AAL68092.1|  410|Drosophila melanogaster AT17625p
           protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +1

Query: 463 LHCEKILFTHQYPNLKLPSRL--GNTLWKTNTATKVLPKLYLKEFNRSLEVTLKKMVS-- 630
           +HC + L   QY N   PSRL    TL         +P    +E      V L+ +    
Sbjct: 24  MHCSRRLLFSQYENRASPSRLTSSGTLGSNEAENDYVPYRQDRETGTKTRVLLEALRERF 83

Query: 631 --TKAQMNRLIISDQLIN 678
             T A++ + IISD+L++
Sbjct: 84  RFTDAELQK-IISDELVH 100


>AE014134-2484|AAF53386.1|  410|Drosophila melanogaster CG18124-PA
           protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +1

Query: 463 LHCEKILFTHQYPNLKLPSRL--GNTLWKTNTATKVLPKLYLKEFNRSLEVTLKKMVS-- 630
           +HC + L   QY N   PSRL    TL         +P    +E      V L+ +    
Sbjct: 24  MHCSRRLLFSQYENRASPSRLTSSGTLGSNEAENDYVPYRQDRETGTKTRVLLEALRERF 83

Query: 631 --TKAQMNRLIISDQLIN 678
             T A++ + IISD+L++
Sbjct: 84  RFTDAELQK-IISDELVH 100


>BT001869-1|AAN71639.1|  791|Drosophila melanogaster SD05152p
           protein.
          Length = 791

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +1

Query: 157 ITCLIYQLSLL*NLRAKTEMQTEDCKFVKLIGHLDAVKWLQNPRYYRPSPGYLYLED 327
           +TC+I+   LL +L A   ++ + C+  +L G       LQ P   R + GYL  +D
Sbjct: 407 VTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIERENNGYLVEDD 463


>AE014297-3580|AAN14006.1|  791|Drosophila melanogaster CG31127-PA
           protein.
          Length = 791

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +1

Query: 157 ITCLIYQLSLL*NLRAKTEMQTEDCKFVKLIGHLDAVKWLQNPRYYRPSPGYLYLED 327
           +TC+I+   LL +L A   ++ + C+  +L G       LQ P   R + GYL  +D
Sbjct: 407 VTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIERENNGYLVEDD 463


>BT024993-1|ABE01223.1|  257|Drosophila melanogaster IP09932p
           protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -2

Query: 659 IINLFI*ALVETIFFKVTSRDRLNSFKYNFGKTFVAVF 546
           ++N F+  LVETIFF +  +DR  SF + F    +A F
Sbjct: 104 LVNKFV-DLVETIFFVLRKKDRQISFLHVFHHFAMAFF 140


>AM292552-1|CAL23476.1|  257|Drosophila melanogaster elongase
           protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -2

Query: 659 IINLFI*ALVETIFFKVTSRDRLNSFKYNFGKTFVAVF 546
           ++N F+  LVETIFF +  +DR  SF + F    +A F
Sbjct: 104 LVNKFV-DLVETIFFVLRKKDRQISFLHVFHHFAMAFF 140


>AE014297-1052|AAF54461.1|  257|Drosophila melanogaster CG16905-PA
           protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -2

Query: 659 IINLFI*ALVETIFFKVTSRDRLNSFKYNFGKTFVAVF 546
           ++N F+  LVETIFF +  +DR  SF + F    +A F
Sbjct: 104 LVNKFV-DLVETIFFVLRKKDRQISFLHVFHHFAMAFF 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,937,341
Number of Sequences: 53049
Number of extensions: 546461
Number of successful extensions: 1221
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)