Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5j07
         (140 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68316-6|CAA92682.2|  357|Caenorhabditis elegans Hypothetical pr...    29   0.60 
Z81117-7|CAB03315.2|  329|Caenorhabditis elegans Hypothetical pr...    28   0.79 
Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AF016674-6|AAB66129.1|  530|Caenorhabditis elegans Hypothetical ...    25   5.6  
Z83218-1|CAB05686.1|  282|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>Z68316-6|CAA92682.2|  357|Caenorhabditis elegans Hypothetical
           protein K08E4.5 protein.
          Length = 357

 Score = 28.7 bits (61), Expect = 0.60
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 139 FFFINSFIAAHSHWFVVETL 80
           FF IN+F++  + W +VETL
Sbjct: 76  FFLINAFVSLGTPWMIVETL 95


>Z81117-7|CAB03315.2|  329|Caenorhabditis elegans Hypothetical
           protein T06E6.6 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 0.79
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 139 FFFINSFIAAHSHWFVVETLYYNL 68
           F F N FI   +H+ VVE  YY+L
Sbjct: 93  FVFTNFFIVMVNHFLVVENRYYHL 116


>Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical
           protein W05E10.1 protein.
          Length = 484

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -2

Query: 100 WFVVETLYYNLESLYT--PSVMFGTSDYSAVVSPG 2
           WFV++T+  N+ESL +     M+  + + A+V  G
Sbjct: 260 WFVIQTIAVNIESLCSVFTIAMYNWTSHQAIVYGG 294


>AF016674-6|AAB66129.1|  530|Caenorhabditis elegans Hypothetical
           protein C03H5.6 protein.
          Length = 530

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 139 FFFINSFIAAHSHWFVVETLYYN 71
           FF +  F++ H+H FVV+  Y++
Sbjct: 478 FFLLFPFLSLHNHNFVVKKNYFS 500


>Z83218-1|CAB05686.1|  282|Caenorhabditis elegans Hypothetical
           protein C31A11.4 protein.
          Length = 282

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -2

Query: 139 FFFINSFIAAHSHWFVVETLYYNLESLYT 53
           FFF++SF+AA    F + + Y+N+  L++
Sbjct: 3   FFFVSSFLAA---LFSITSCYFNVFILFS 28


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,017,641
Number of Sequences: 27780
Number of extensions: 39304
Number of successful extensions: 114
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 12,740,198
effective HSP length: 27
effective length of database: 11,990,138
effective search space used: 227812622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)