Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5j04
         (339 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical ...    29   1.1  
Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical pr...    28   1.5  
U61947-10|AAB03132.1|  932|Caenorhabditis elegans Kinesin-like p...    28   2.0  
AY211948-1|AAO34669.1|  932|Caenorhabditis elegans kinesin-like ...    28   2.0  
AB033538-1|BAB19356.2|  930|Caenorhabditis elegans kinesin like ...    28   2.0  
AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical ...    27   2.6  
AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical ...    27   2.6  
AF016442-1|AAB65918.1|  340|Caenorhabditis elegans Hypothetical ...    27   2.6  
Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical pr...    27   4.5  
U88311-4|AAB42344.1|  537|Caenorhabditis elegans Udp-glucuronosy...    27   4.5  
AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical ...    27   4.5  
AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical ...    27   4.5  
AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical...    27   4.5  
AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical ...    27   4.5  
AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical ...    27   4.5  
U23168-8|AAC38809.2|  153|Caenorhabditis elegans Hypothetical pr...    26   7.9  

>AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical
           protein Y49C4A.8a protein.
          Length = 536

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 324 DIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVN 205
           DI+ +  +F I  S I   T+RF+Y F R  FI   +  N
Sbjct: 497 DIYTLFALFYIFVSTIIIVTIRFVYKFTRKHFILVKSKEN 536


>Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical
           protein F23A7.7 protein.
          Length = 965

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 300 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 172
           FE     I    V  IYN   +S +RK +++ ++   + FRLH
Sbjct: 597 FEYFYHTIQRTLVPEIYNGIGMSIMRKMSALQEIKAEVAFRLH 639


>U61947-10|AAB03132.1|  932|Caenorhabditis elegans Kinesin-like
           protein protein 18 protein.
          Length = 932

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 129 PSESLFVGGN-TKINSATGSKDYHI 200
           PSESLFVGG    I +  GSK Y +
Sbjct: 20  PSESLFVGGRVVTIETDNGSKRYEL 44


>AY211948-1|AAO34669.1|  932|Caenorhabditis elegans kinesin-like
           protein-18 protein.
          Length = 932

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 129 PSESLFVGGN-TKINSATGSKDYHI 200
           PSESLFVGG    I +  GSK Y +
Sbjct: 20  PSESLFVGGRVVTIETDNGSKRYEL 44


>AB033538-1|BAB19356.2|  930|Caenorhabditis elegans kinesin like
           protein KLP-18 protein.
          Length = 930

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 129 PSESLFVGGN-TKINSATGSKDYHI 200
           PSESLFVGG    I +  GSK Y +
Sbjct: 18  PSESLFVGGRVVTIETDNGSKRYEL 42


>AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical
           protein Y73F8A.9 protein.
          Length = 419

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +1

Query: 13  CSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVC--SSVVTLKSTVQ 177
           C     +NE + S+  +TC     Y  + A AP+ C+ S +  C  S V     TVQ
Sbjct: 94  CQFAPSMNECQ-SSCQQTCQTSSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQ 149


>AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical
           protein Y73F8A.8 protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +1

Query: 13  CSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVC--SSVVTLKSTVQ 177
           C     +NE + S+  +TC     Y  + A AP+ C+ S +  C  S V     TVQ
Sbjct: 95  CQFAPSMNECQ-SSCQQTCQTSSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQ 150


>AF016442-1|AAB65918.1|  340|Caenorhabditis elegans Hypothetical
           protein K12B6.3 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 81  ELRKHDCRSPTLLRKFPSESLFVGGNTKIN 170
           E R HDC+  T LRKF    L   G  K++
Sbjct: 137 ETRTHDCKDLTRLRKFFEAVLAYTGYAKVS 166


>Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical
           protein K02B7.1 protein.
          Length = 742

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 300 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 172
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 520 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 562


>Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical
           protein C32H11.2 protein.
          Length = 332

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 263 FVLFIIFIDFHLFVKITLLINYMVVFAS--GCTVDFSVTTDEQTF 135
           FV  IIF+   +   IT +++Y++ F +   C V F  +T+   F
Sbjct: 101 FVFLIIFLSMCMLYYITQVLHYLISFLAIRKCFVYFFPSTERTIF 145


>U88311-4|AAB42344.1|  537|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein28 protein.
          Length = 537

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 327 FDIHFIEVMFEISNSVINANTVRFIYNFYRLSF 229
           FDI+ +  +F IS   I A ++RFIY   R  F
Sbjct: 496 FDIYALFALFYISVGTIIAISIRFIYQKARKYF 528


>AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical
           protein W03G1.4 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 300 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 172
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


>AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical
           protein C17B7.7 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 300 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 172
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


>AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical
           protein K02E7.3 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 300 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 172
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


>AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical
           protein R09E12.6 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 300 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 172
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


>AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical
           protein Y55F3C.6 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 300 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 172
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


>U23168-8|AAC38809.2|  153|Caenorhabditis elegans Hypothetical
           protein B0228.6 protein.
          Length = 153

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = +3

Query: 51  SFLQNVRQTMELRKHDCRSPTLLRKFPSESLFVGGNTKINSATGSKDYHIIY*QSYF 221
           S  + V +T +++K   ++  L +   ++++ V  N K+     SKD HI+  +  F
Sbjct: 7   STFEFVSETGQIKKRGSKTSELKQNETTDAVVVN-NEKVKKRRNSKDSHIVLAKEIF 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,885,868
Number of Sequences: 27780
Number of extensions: 125281
Number of successful extensions: 375
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)