Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5j02
         (717 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   5.0  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   5.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   5.0  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   8.8  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 42  FSMSLNFLFLRIKVIPVFFVYIRL 113
           FS S  FL L I  + ++F+Y R+
Sbjct: 9   FSASSVFLSLLIPALILYFIYFRI 32


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 588 SYAINYVNKY*NDCGTFYRKLF 653
           +Y  NY N Y N+    Y+KL+
Sbjct: 96  NYNNNYNNNYNNNYNNNYKKLY 117


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 588 SYAINYVNKY*NDCGTFYRKLF 653
           +Y  NY N Y N+    Y+KL+
Sbjct: 96  NYNNNYNNNYNNNYNNNYKKLY 117


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 547 NVLLFNYLYKKHANYTSMMES 485
           NVL F+Y +  ++N T  +ES
Sbjct: 23  NVLDFDYYFYDYSNRTQALES 43


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 532 NYLYKKHANYTSMMESSHYKS 470
           NY Y  + NY +  +  +YK+
Sbjct: 88  NYKYSNYNNYNNYNKKLYYKN 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,402
Number of Sequences: 438
Number of extensions: 3706
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)