Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5i24
(646 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.07c |tsf1||mitochondrial translation elongation factor E... 41 1e-04
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 32 0.062
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.57
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.0
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 28 1.3
SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 27 3.1
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 27 3.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.0
SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.3
SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family ... 25 7.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 7.1
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 25 7.1
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 7.1
SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces pom... 25 7.1
>SPBC800.07c |tsf1||mitochondrial translation elongation factor
EF-Ts Tsf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 299
Score = 41.1 bits (92), Expect = 1e-04
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 13/169 (7%)
Frame = +1
Query: 160 LAKLRKKTGYTIANCKKALEMHN-NDADKAETWLHEQAQAMGWAKATKLAGRTALQGLV- 333
+ KLR +T ++ K+++E + + A L ++ G A K RTA +G +
Sbjct: 37 IKKLRSETNASMDLVKQSVEEAGVGNLELAREILKKKIVQRGGKLAEKSKNRTAKEGWII 96
Query: 334 -AVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFA---HTKLQAKGPITKME 501
+ D + E+NCE+DFVA+ FQ + A + H+ + +
Sbjct: 97 QCISEDGRKAVMAEINCESDFVAQTTPFQDLARRIASTFLHYLPTNHSSYSVEATLKNEI 156
Query: 502 LDSEQLGTLHAEGGKK-------LSEILALFIGSVGENAVLRRAECWKA 627
L + + + E +K L E + GE ++R C A
Sbjct: 157 LKHQAYVSKNHEANEKDVSSNVSLEEEIVKMTSFTGEKVQVQRLHCMNA 205
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 32.3 bits (70), Expect = 0.062
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -3
Query: 389 SVSQLSSTRAPW-FLSNLTATNPWRAVLPANLVAFAHPIAWACSWSHV-SALSASLLCIS 216
S +L+ST W F++N+ + PW LP+ + H + S + + L LLCIS
Sbjct: 3948 SYLKLASTEPLWLFINNIHLSTPWAEKLPSKMSNHLHKNSRIVCLSEIHNQLPHQLLCIS 4007
Query: 215 NAFL 204
+ +
Sbjct: 4008 RSIV 4011
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.1 bits (62), Expect = 0.57
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Frame = -3
Query: 614 SARLSTAFSPTEPIKSANISDNFFPPSACNVPSCSLSSSIFVIGPLACSLV*ANLNEAIA 435
S+ S+ S + I S++ S F S + PS S+SSSI + S + + I+
Sbjct: 581 SSSTSSPSSTSLSISSSSTSSTFSSASTSS-PS-SISSSISSSSTILSSPTPSTSSLMIS 638
Query: 434 ASSIIF*NLSFLATKSVSQLSSTRAPWFLSNLTATNPWRAVLPANLVAFAHPIAWA---- 267
+SSII + S L++ + S+ + S++ ++ ++L+ + P+A +
Sbjct: 639 SSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSP 698
Query: 266 --CSWSHVSALSASLLCISNAFLQL 198
S S VS SASL I+++ L L
Sbjct: 699 IPSSSSLVSTYSASLSNITHSSLSL 723
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 1.0
Identities = 25/96 (26%), Positives = 47/96 (48%)
Frame = -3
Query: 614 SARLSTAFSPTEPIKSANISDNFFPPSACNVPSCSLSSSIFVIGPLACSLV*ANLNEAIA 435
S+ LST+ P+ S++ S + S+ + S S SSS + + S + + I+
Sbjct: 232 SSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTIS 291
Query: 434 ASSIIF*NLSFLATKSVSQLSSTRAPWFLSNLTATN 327
+SS + S +T S SS+ + F S L++++
Sbjct: 292 SSSSS--SSSPTSTSSTISSSSSSSSSFSSTLSSSS 325
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 201 ISDCVARFFPEFSKQ--RRFSCFIRWTCMNSSNQLENHLGVCLHFLLHSPQN 52
+SD V+R E + + S F+R ++SSN +N+L VCL LL +N
Sbjct: 1189 MSDFVSRVEGENTSKIFTEISKFVR-EIISSSNSFKNYLLVCLRMLLEVAKN 1239
>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1225
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 27 FFNFDILGYSVVNEAKSANILQDDFP 104
F FDI+ Y + A+ I DD P
Sbjct: 916 FMGFDIISYKIAKPAQELAIFLDDLP 941
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 184 GYTIANCKKALEMHNNDADKAETWL 258
G+T+A +K L NN+ ++A W+
Sbjct: 652 GFTVAQARKGLLESNNNIERAVDWI 676
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 4.0
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = -3
Query: 641 TSSLFAFQHSARLSTAFSPTEPIKSANISDNFFPPSACNVPSCSLSSSIFVIGPLACSLV 462
+SS +A S S + S N + + P S+ S + SSS+ + SL
Sbjct: 71 SSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLA 130
Query: 461 *ANL-NEAIAASSIIF*NLSFLATKSVSQLSST 366
+++ + ++A+SSI +L+ +T S S SS+
Sbjct: 131 SSSITSSSLASSSITSSSLASSSTTSSSLASSS 163
Score = 25.4 bits (53), Expect = 7.1
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = -3
Query: 644 LTSSLFAFQHSARLSTAFSPT-EPIKSANISDNFFPPSACNVPSCSLSSSIFVIGPLACS 468
LTSS S +T+ SPT + S++ + + S + S SL+SS LA S
Sbjct: 85 LTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASS--STTSSSLASSSITSSSLASS 142
Query: 467 LV*ANLNEAIAASSIIF*NLSFLATKSVSQLSSTRAPW--FLSNLTATN 327
+ + ++A+SS +L+ +T S + + T + LS+ A+N
Sbjct: 143 SI---TSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASN 188
>SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 243
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 33 NFDILGYSVVNEAKSANILQDDFPAD 110
N ++G+ V NE K AN+L P D
Sbjct: 149 NLHLVGHGVENEIKYANVLGIPIPKD 174
>SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 124 TSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNND 234
T P Y ES AK+ K+ G+ + L H+N+
Sbjct: 301 TFPFYHLIESEGFAKMAKRLGHGVYGLPYYLVFHHNE 337
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 127 SPAYKAAE-SSLLAKLRKKTGYTIANCKKALEMHNNDADKAETW 255
+PAY+ E ++ K +K+TG N K + D A+ W
Sbjct: 345 NPAYEKWEVREVVGKKKKRTGILAINNKSIVLTFTKTMDAAQVW 388
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 121 HTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMG 282
H + +S L +R +A K +E A KA+TWL +A+G
Sbjct: 741 HKDECFPNTDSDLTVLVRYDDNALLAAYSKVVER----AHKADTWLENYKEALG 790
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 104 WKIILEYVCTFCFIHHRIT*NIEIKKIANCQFYF 3
WKI++E FIHH+ ++++K AN F
Sbjct: 671 WKILVEVALGLQFIHHKNYVHLDLKP-ANVMITF 703
>SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 416
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 349 KNHGALVELNCETDFVAKNDKFQKMIEDAA 438
K +G +V++N DF+ K + I+DAA
Sbjct: 258 KTNGGVVQVNFYQDFIRKPGSDRATIDDAA 287
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,725,188
Number of Sequences: 5004
Number of extensions: 55889
Number of successful extensions: 195
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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