Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5i24
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p pro...   182   3e-46
AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA...   182   3e-46
M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein ( D.me...    29   5.4  
BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p pro...    29   5.4  
BT001685-1|AAN71440.1| 1017|Drosophila melanogaster RE58116p pro...    29   5.4  
AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA ...    29   5.4  
BT029142-1|ABJ17075.1| 1613|Drosophila melanogaster RE40504p pro...    28   9.4  
BT015191-1|AAT94420.1|  410|Drosophila melanogaster RH35908p pro...    28   9.4  
AY047522-1|AAK77254.1|  713|Drosophila melanogaster GH03013p pro...    28   9.4  
AE013599-3460|AAM71119.1|  410|Drosophila melanogaster CG30092-P...    28   9.4  
AE013599-3459|AAF46896.3| 1622|Drosophila melanogaster CG30092-P...    28   9.4  
AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-P...    28   9.4  

>AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p
           protein.
          Length = 318

 Score =  182 bits (444), Expect = 3e-46
 Identities = 86/163 (52%), Positives = 110/163 (67%)
 Frame = +1

Query: 148 ESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQG 327
           E S LA LRKKTGYT ANCKKALE HNND   AE WLHEQAQ +GW+KATK+A R    G
Sbjct: 28  EKSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAHG 87

Query: 328 LVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELD 507
           L+ V    N GA+VELNCETDFVA+ND F++ ++  A    ++        G + K+  D
Sbjct: 88  LIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDL-TDFDGDLWKLGFD 146

Query: 508 SEQLGTLHAEGGKKLSEILALFIGSVGENAVLRRAECWKANSE 636
           ++ L  L  E G+ L + LAL IG++GENA +RRA C+KAN++
Sbjct: 147 ADALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANND 189


>AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA
           protein.
          Length = 318

 Score =  182 bits (444), Expect = 3e-46
 Identities = 86/163 (52%), Positives = 110/163 (67%)
 Frame = +1

Query: 148 ESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQG 327
           E S LA LRKKTGYT ANCKKALE HNND   AE WLHEQAQ +GW+KATK+A R    G
Sbjct: 28  EKSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAHG 87

Query: 328 LVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELD 507
           L+ V    N GA+VELNCETDFVA+ND F++ ++  A    ++        G + K+  D
Sbjct: 88  LIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDL-TDFDGDLWKLGFD 146

Query: 508 SEQLGTLHAEGGKKLSEILALFIGSVGENAVLRRAECWKANSE 636
           ++ L  L  E G+ L + LAL IG++GENA +RRA C+KAN++
Sbjct: 147 ADALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANND 189


>M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein (
           D.melanogaster alpha-spectrin mRNA, complete cds. ).
          Length = 2415

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
 Frame = +1

Query: 208 KALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCET 387
           +  +    DAD+ E+W+HE+ QA   A        T LQ     K  K+     E++  +
Sbjct: 47  RRFQYFKRDADELESWIHEKLQA---ASEESYRDPTNLQ----AKIQKHQAFEAEVSAHS 99

Query: 388 DFVAKNDKF-QKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEIL 564
           + +   D   Q+MI         FA   +Q +  + ++    E L +  AE G KL + L
Sbjct: 100 NAIVSLDNTGQEMINQQ-----HFASESIQVR--LDELHKLWELLLSRLAEKGLKLQQAL 152

Query: 565 AL 570
            L
Sbjct: 153 VL 154


>BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p
           protein.
          Length = 1557

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
 Frame = +1

Query: 208 KALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCET 387
           +  +    DAD+ E+W+HE+ QA   A        T LQ     K  K+     E++  +
Sbjct: 47  RRFQYFKRDADELESWIHEKLQA---ASEESYRDPTNLQ----AKIQKHQAFEAEVSAHS 99

Query: 388 DFVAKNDKF-QKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEIL 564
           + +   D   Q+MI         FA   +Q +  + ++    E L +  AE G KL + L
Sbjct: 100 NAIVSLDNTGQEMINQQ-----HFASESIQVR--LDELHKLWELLLSRLAEKGLKLQQAL 152

Query: 565 AL 570
            L
Sbjct: 153 VL 154


>BT001685-1|AAN71440.1| 1017|Drosophila melanogaster RE58116p
           protein.
          Length = 1017

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +1

Query: 124 TSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAM 279
           TSP    + S +   ++KK+  TIA  +KAL   + +AD     L  +A+++
Sbjct: 718 TSPLSNRSNSLIFGSIKKKSTLTIAESEKALLKADLEADMKYKQLIMEAESL 769


>AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA
           protein.
          Length = 2415

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
 Frame = +1

Query: 208 KALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCET 387
           +  +    DAD+ E+W+HE+ QA   A        T LQ     K  K+     E++  +
Sbjct: 47  RRFQYFKRDADELESWIHEKLQA---ASEESYRDPTNLQ----AKIQKHQAFEAEVSAHS 99

Query: 388 DFVAKNDKF-QKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEIL 564
           + +   D   Q+MI         FA   +Q +  + ++    E L +  AE G KL + L
Sbjct: 100 NAIVSLDNTGQEMINQQ-----HFASESIQVR--LDELHKLWELLLSRLAEKGLKLQQAL 152

Query: 565 AL 570
            L
Sbjct: 153 VL 154


>BT029142-1|ABJ17075.1| 1613|Drosophila melanogaster RE40504p protein.
          Length = 1613

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -3

Query: 620  QHSARLSTAFSPTEPIK-SANISDNFFPPSACNVPSCSLSSSIF--VIGP 480
            Q SAR S +F PTE  + + N+S N  P     VP C ++ SI   V GP
Sbjct: 1529 QGSARFSVSFVPTESCEHTINVSFNKMP-----VPGCPITVSISGGVAGP 1573


>BT015191-1|AAT94420.1|  410|Drosophila melanogaster RH35908p
           protein.
          Length = 410

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -3

Query: 620 QHSARLSTAFSPTEPIK-SANISDNFFPPSACNVPSCSLSSSIF--VIGP 480
           Q SAR S +F PTE  + + N+S N  P     VP C ++ SI   V GP
Sbjct: 326 QGSARFSVSFVPTESCEHTINVSFNKMP-----VPGCPITVSISGGVAGP 370


>AY047522-1|AAK77254.1|  713|Drosophila melanogaster GH03013p
           protein.
          Length = 713

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -3

Query: 620 QHSARLSTAFSPTEPIK-SANISDNFFPPSACNVPSCSLSSSIF--VIGP 480
           Q SAR S +F PTE  + + N+S N  P     VP C ++ SI   V GP
Sbjct: 629 QGSARFSVSFVPTESCEHTINVSFNKMP-----VPGCPITVSISGGVAGP 673


>AE013599-3460|AAM71119.1|  410|Drosophila melanogaster CG30092-PC,
           isoform C protein.
          Length = 410

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -3

Query: 620 QHSARLSTAFSPTEPIK-SANISDNFFPPSACNVPSCSLSSSIF--VIGP 480
           Q SAR S +F PTE  + + N+S N  P     VP C ++ SI   V GP
Sbjct: 326 QGSARFSVSFVPTESCEHTINVSFNKMP-----VPGCPITVSISGGVAGP 370


>AE013599-3459|AAF46896.3| 1622|Drosophila melanogaster CG30092-PB,
            isoform B protein.
          Length = 1622

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -3

Query: 620  QHSARLSTAFSPTEPIK-SANISDNFFPPSACNVPSCSLSSSIF--VIGP 480
            Q SAR S +F PTE  + + N+S N  P     VP C ++ SI   V GP
Sbjct: 1538 QGSARFSVSFVPTESCEHTINVSFNKMP-----VPGCPITVSISGGVAGP 1582


>AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-PD,
            isoform D protein.
          Length = 2964

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -3

Query: 620  QHSARLSTAFSPTEPIK-SANISDNFFPPSACNVPSCSLSSSIF--VIGP 480
            Q SAR S +F PTE  + + N+S N  P     VP C ++ SI   V GP
Sbjct: 1538 QGSARFSVSFVPTESCEHTINVSFNKMP-----VPGCPITVSISGGVAGP 1582


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,417,597
Number of Sequences: 53049
Number of extensions: 621539
Number of successful extensions: 1696
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)