Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5i12
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   5.7  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    23   7.5  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    23   7.5  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 143 SKSTSNYENVYRKNQKYVLWNRKVNIEIDTLRCLSVP 253
           +KST   +N     Q Y+   R  NI++D L C  +P
Sbjct: 103 AKSTFEIDNQTVSQQAYLQQIRAFNIQVDNL-CQFLP 138


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 182 NQKYVLWNRKVNIEIDTLRCL 244
           +Q Y LW +++  E+D++R L
Sbjct: 61  HQAYELWFKQIIFELDSIRDL 81


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 182 NQKYVLWNRKVNIEIDTLRCL 244
           +Q Y LW +++  E+D++R L
Sbjct: 61  HQAYELWFKQIIFELDSIRDL 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,013
Number of Sequences: 2352
Number of extensions: 11231
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)