Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5i03
(188 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 1.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 1.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 5.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 19 5.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 19 7.2
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 19 7.2
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 19 7.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 18 9.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 18 9.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 18 9.5
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 18 9.5
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 20.6 bits (41), Expect = 1.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 87 LFYI*NQILDLYL*SQILVDFFYCP 13
LFY N IL L S + V FY P
Sbjct: 234 LFYTVNLILPTVLISFLCVLVFYLP 258
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 123 NMWIRFMGT 97
N+W+RF+ T
Sbjct: 76 NVWLRFIWT 84
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 20.6 bits (41), Expect = 1.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 87 LFYI*NQILDLYL*SQILVDFFYCP 13
+FY+ N IL L + + + FY P
Sbjct: 214 MFYVFNLILPCILINSVALLVFYVP 238
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.0 bits (37), Expect = 5.4
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -2
Query: 121 YVDSIYGHDFI 89
YV++ +GHD +
Sbjct: 1347 YVENTFGHDTV 1357
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 19.0 bits (37), Expect = 5.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 80 TYEIKSSIYICKVRY*WIFFIVLVDR 3
T ++KS KV W F +++DR
Sbjct: 503 TDQLKSEELNAKVTNDWKFAAMVIDR 528
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 94 NRAHKSNPHILQAPNKPTT 150
N + NP I AP+ T+
Sbjct: 508 NSSPSPNPRIASAPSSSTS 526
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 95 FYYYFTYEIKSSI 57
++YY+TY+ SI
Sbjct: 437 WFYYYTYKGAHSI 449
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 95 FYYYFTYEIKSSI 57
++YY+TY+ SI
Sbjct: 437 WFYYYTYKGAHSI 449
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 18.2 bits (35), Expect = 9.5
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -1
Query: 179 YFQFHLILSLVVGLFGACKICGFDLWARFYYYF 81
Y+ F L +S ++ L + +W+ F Y F
Sbjct: 90 YYLFSLAVSDLLLLISGLPPEIYYIWSHFPYVF 122
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 113 IHIFYKLQINRRP 151
IHI +L + RRP
Sbjct: 350 IHILPRLLVMRRP 362
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 113 IHIFYKLQINRRP 151
IHI +L + RRP
Sbjct: 350 IHILPRLLVMRRP 362
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 18.2 bits (35), Expect = 9.5
Identities = 4/14 (28%), Positives = 10/14 (71%)
Frame = -1
Query: 95 FYYYFTYEIKSSIY 54
+YY+FT ++++
Sbjct: 475 YYYFFTQRTSTNLW 488
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,129
Number of Sequences: 438
Number of extensions: 686
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used: 2558940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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