Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5h22
         (612 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017271-1|AAH17271.1|  253|Homo sapiens metaxin 2 protein.           109   6e-24
BC088359-1|AAH88359.1|  263|Homo sapiens metaxin 2 protein.           109   8e-24
BC067831-1|AAH67831.1|  263|Homo sapiens metaxin 2 protein.           109   8e-24
AF053551-1|AAC25105.1|  263|Homo sapiens metaxin 2 protein.           109   8e-24
AC073069-1|AAX93188.1|  249|Homo sapiens unknown protein.             108   2e-23
BC028004-1|AAH28004.1|  621|Homo sapiens DMXL1 protein protein.        29   9.8  
AJ005821-1|CAA06718.2| 3027|Homo sapiens X-like 1 protein protein.     29   9.8  

>BC017271-1|AAH17271.1|  253|Homo sapiens metaxin 2 protein.
          Length = 253

 Score =  109 bits (263), Expect = 6e-24
 Identities = 53/79 (67%), Positives = 61/79 (77%)
 Frame = +1

Query: 373 MAQEPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRV 552
           +A EPWP+N  LYQ  + EQILL DNA+ LAVQAFL+MCNLP +V  R NAE+MSPSG+V
Sbjct: 3   IAAEPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKV 62

Query: 553 PFIKCGAFVVSELEPIXQF 609
           PFI  G  VVSEL PI QF
Sbjct: 63  PFIHVGNQVVSELGPIVQF 81


>BC088359-1|AAH88359.1|  263|Homo sapiens metaxin 2 protein.
          Length = 263

 Score =  109 bits (262), Expect = 8e-24
 Identities = 53/78 (67%), Positives = 60/78 (76%)
 Frame = +1

Query: 376 AQEPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVP 555
           A EPWP+N  LYQ  + EQILL DNA+ LAVQAFL+MCNLP +V  R NAE+MSPSG+VP
Sbjct: 14  AAEPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKVP 73

Query: 556 FIKCGAFVVSELEPIXQF 609
           FI  G  VVSEL PI QF
Sbjct: 74  FIHVGNQVVSELGPIVQF 91


>BC067831-1|AAH67831.1|  263|Homo sapiens metaxin 2 protein.
          Length = 263

 Score =  109 bits (262), Expect = 8e-24
 Identities = 53/78 (67%), Positives = 60/78 (76%)
 Frame = +1

Query: 376 AQEPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVP 555
           A EPWP+N  LYQ  + EQILL DNA+ LAVQAFL+MCNLP +V  R NAE+MSPSG+VP
Sbjct: 14  AAEPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKVP 73

Query: 556 FIKCGAFVVSELEPIXQF 609
           FI  G  VVSEL PI QF
Sbjct: 74  FIHVGNQVVSELGPIVQF 91


>AF053551-1|AAC25105.1|  263|Homo sapiens metaxin 2 protein.
          Length = 263

 Score =  109 bits (262), Expect = 8e-24
 Identities = 53/78 (67%), Positives = 60/78 (76%)
 Frame = +1

Query: 376 AQEPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVP 555
           A EPWP+N  LYQ  + EQILL DNA+ LAVQAFL+MCNLP +V  R NAE+MSPSG+VP
Sbjct: 14  AAEPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKVP 73

Query: 556 FIKCGAFVVSELEPIXQF 609
           FI  G  VVSEL PI QF
Sbjct: 74  FIHVGNQVVSELGPIVQF 91


>AC073069-1|AAX93188.1|  249|Homo sapiens unknown protein.
          Length = 249

 Score =  108 bits (259), Expect = 2e-23
 Identities = 52/76 (68%), Positives = 59/76 (77%)
 Frame = +1

Query: 382 EPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVPFI 561
           EPWP+N  LYQ  + EQILL DNA+ LAVQAFL+MCNLP +V  R NAE+MSPSG+VPFI
Sbjct: 2   EPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKVPFI 61

Query: 562 KCGAFVVSELEPIXQF 609
             G  VVSEL PI QF
Sbjct: 62  HVGNQVVSELGPIVQF 77


>BC028004-1|AAH28004.1|  621|Homo sapiens DMXL1 protein protein.
          Length = 621

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -2

Query: 164 EERGVGMDDLNFHSEKRELLVFFVIINFSSTSFSNKLQSLMILLLIS 24
           EE   G+DDL  + EK+EL    ++ N S TS S+      I +L+S
Sbjct: 438 EETDDGVDDLKINPEKKELGCDKMVPNSSFTSLSSAAIDHQIEVLLS 484


>AJ005821-1|CAA06718.2| 3027|Homo sapiens X-like 1 protein protein.
          Length = 3027

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -2

Query: 164 EERGVGMDDLNFHSEKRELLVFFVIINFSSTSFSNKLQSLMILLLIS 24
           EE   G+DDL  + EK+EL    ++ N S TS S+      I +L+S
Sbjct: 438 EETDDGVDDLKINPEKKELGCDKMVPNSSFTSLSSAAIDHQIEVLLS 484


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,637,943
Number of Sequences: 237096
Number of extensions: 1558200
Number of successful extensions: 6885
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6885
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)