Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5h20
         (225 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023835-8|CAA19491.1|  483|Caenorhabditis elegans Hypothetical ...    27   1.4  
Z82274-7|CAD21646.1|  331|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z70684-5|CAA94600.1|  233|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z70684-3|CAA94598.1|  233|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AL021497-5|CAA16399.1|  141|Caenorhabditis elegans Hypothetical ...    26   4.1  
Z81124-11|CAB03370.2|  306|Caenorhabditis elegans Hypothetical p...    25   5.5  
Z75526-2|CAA99768.2|  341|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z73098-9|CAA97335.1|  141|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z81542-4|CAB04418.1|  233|Caenorhabditis elegans Hypothetical pr...    25   7.2  
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p...    25   7.2  
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p...    25   7.2  
U39471-1|AAA80132.4|  461|Caenorhabditis elegans Intestinal acid...    25   7.2  
AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical...    25   9.6  
AF043693-6|AAB97539.1|  640|Caenorhabditis elegans Hypothetical ...    25   9.6  

>AL023835-8|CAA19491.1|  483|Caenorhabditis elegans Hypothetical
           protein Y37A1B.8 protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -2

Query: 215 EFYNLIKLLHYKNMSDSIYIIQSFSKKEISTIQNYNLP 102
           E  N +K L+Y  + D  Y+IQ  S K ++++   NLP
Sbjct: 394 ENLNFLKYLNYIALFDDEYVIQILSNKNLTSV---NLP 428


>Z82274-7|CAD21646.1|  331|Caenorhabditis elegans Hypothetical
           protein JC8.13 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = -2

Query: 221 FFEFYNLIKLLHYKNMSDSIYIIQSFSKKEISTIQNYNLPLLLTPHALTSGWPDVESRER 42
           FF+ +  +  L   ++SD + I++  + K IS    +  P+   P  L S W    +   
Sbjct: 233 FFDIFQQLDPLLKHSLSDCVSILRQSAMKNISVA--FKTPVARLPSQLLSDWLGFPANLE 290

Query: 41  YF 36
           +F
Sbjct: 291 FF 292


>Z70684-5|CAA94600.1|  233|Caenorhabditis elegans Hypothetical
           protein F28D1.5 protein.
          Length = 233

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 134 EISTIQNYNLPLLLTPH 84
           ++S +  YNLP+L+ PH
Sbjct: 117 DVSLVDGYNLPVLIDPH 133


>Z70684-3|CAA94598.1|  233|Caenorhabditis elegans Hypothetical
           protein F28D1.3 protein.
          Length = 233

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 134 EISTIQNYNLPLLLTPH 84
           ++S +  YNLP+L+ PH
Sbjct: 117 DVSLVDGYNLPVLIDPH 133


>AL021497-5|CAA16399.1|  141|Caenorhabditis elegans Hypothetical
           protein Y51A2D.9 protein.
          Length = 141

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 150 KLFEKGNIYDTKL 112
           KLFE G IYDTK+
Sbjct: 47  KLFEDGTIYDTKM 59


>Z81124-11|CAB03370.2|  306|Caenorhabditis elegans Hypothetical
           protein T21B4.1 protein.
          Length = 306

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -2

Query: 209 YNLIKLLHYKNMS-DSIYIIQSFSKKEISTIQNYNLPLLLTPHALTSGWPDVE 54
           +  + L  + NM+  +IY +  F    +S I N+ L +L     L    PD E
Sbjct: 65  FQTVSLFFWPNMNIQTIYYMYQFLMSTVSPIFNFLLAILALQRFLIFFLPDFE 117


>Z75526-2|CAA99768.2|  341|Caenorhabditis elegans Hypothetical
           protein C06H2.2 protein.
          Length = 341

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 13  RTFKNSH*KYLSRDSTSGQPDVSACGV 93
           RT+ +   KY   DS S QP+VS C +
Sbjct: 180 RTWVSEDEKYAVLDSESVQPEVSICNL 206


>Z73098-9|CAA97335.1|  141|Caenorhabditis elegans Hypothetical
           protein T21C9.8 protein.
          Length = 141

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 150 KLFEKGNIYDTKL 112
           KL+E G IYDTKL
Sbjct: 46  KLYEDGTIYDTKL 58


>Z81542-4|CAB04418.1|  233|Caenorhabditis elegans Hypothetical
           protein F49A5.6 protein.
          Length = 233

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -2

Query: 134 EISTIQNYNLPLLLTPHALT 75
           ++S +  YN+P+ + PH ++
Sbjct: 117 DVSMVDGYNIPVFIQPHGVS 136


>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 212 FYNLIKLLHYKNMSDSIYIIQSFSKKEI 129
           F+  ++ L+YK  +D I ++QSF    I
Sbjct: 16  FWPTVESLNYKCHNDQILVVQSFGNDTI 43


>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 212 FYNLIKLLHYKNMSDSIYIIQSFSKKEI 129
           F+  ++ L+YK  +D I ++QSF    I
Sbjct: 16  FWPTVESLNYKCHNDQILVVQSFGNDTI 43


>U39471-1|AAA80132.4|  461|Caenorhabditis elegans Intestinal acid
           phosphatase protein4 protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = -2

Query: 212 FYNLIKLLHYKNMSDSIYIIQSFSKKEISTIQNYNLPLLLTPHALTSGWPDVESRERYF 36
           + N +K   Y     ++Y + S        +Q    PL  +  AL   W DV++ + YF
Sbjct: 322 YTNRLKFFAYSAHDTTLYALFSLLGVAKLAVQPRGYPLY-SACALFEQWQDVQTNQTYF 379


>AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical
           protein F25E5.1 protein.
          Length = 1062

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 1   FTLSRTFKNSH*KYLSRDSTSGQPDVSACGVNSNGRL 111
           F  +R+F   H K     + + +P + A G+N+N  L
Sbjct: 96  FATTRSFLTPHRKRQLAKTMNAEPRIFAFGLNANNNL 132


>AF043693-6|AAB97539.1|  640|Caenorhabditis elegans Hypothetical
           protein C34B2.7 protein.
          Length = 640

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -2

Query: 218 FEFYNLIKLLHYKNMSDSIYIIQSFSKKEISTIQNYNLPLLLT 90
           + FY+ +K   +    D+I+ +   +++ I  ++NY +P   T
Sbjct: 95  WHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRT 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,190,415
Number of Sequences: 27780
Number of extensions: 65331
Number of successful extensions: 176
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 12,740,198
effective HSP length: 54
effective length of database: 11,240,078
effective search space used: 224801560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)