Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5h19
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate |Schizosacc... 157 1e-39
SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family |Schizos... 52 8e-08
SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyce... 35 0.010
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 31 0.12
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 31 0.16
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 28 1.5
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 27 2.6
SPCC645.08c |snd1||RNA-binding protein Snd1|Schizosaccharomyces ... 27 2.6
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 26 4.5
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 26 6.0
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 25 7.9
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 25 7.9
SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1 |Sc... 25 7.9
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 7.9
SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 25 7.9
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 25 7.9
>SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 211
Score = 157 bits (382), Expect = 1e-39
Identities = 86/190 (45%), Positives = 114/190 (60%)
Frame = +3
Query: 129 IVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQI 308
+V+ RHGESEWN+ NLF GW D LS+ G +EA G+ LK+ GY+FDIA TS L+RAQ
Sbjct: 10 LVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRAQK 69
Query: 309 TLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDVPPPA 488
T IL+E+G+P++ K+ +LNER+YG L GLNK + K+G QVQIWRRS+D+ PP
Sbjct: 70 TCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQIWRRSYDIAPPN 129
Query: 489 MEKDHPYYDTIVNDPRYAADPKPEEFPMYESLKLTIERTLPYWNNVIVPQIKEGKKIIIA 668
E D P Y+S IVP I +G+K++IA
Sbjct: 130 GES--------------LKDTAERVLPYYKS--------------TIVPHILKGEKVLIA 161
Query: 669 AHGNSLRGIV 698
AHGNSLR ++
Sbjct: 162 AHGNSLRALI 171
>SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 209
Score = 52.0 bits (119), Expect = 8e-08
Identities = 30/98 (30%), Positives = 53/98 (54%)
Frame = +3
Query: 126 KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 305
K+ +IRHG+++ N++ + G D +L++ GR +A + L D S +KR +
Sbjct: 2 KVFLIRHGQTDQNKRGILQGSVDTNLNETGRLQAKLLAQRLLP--LDIDQIFCSSMKRCR 59
Query: 306 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKAE 419
T+ L+ +P++P+ T + ER YG L G+N E
Sbjct: 60 ETIAPYLEL--KPEVPIVYTDLIRERVYGDLEGMNVVE 95
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 576 ESLKLTIERTLPYWNNVIVPQIKEGKKIIIAAHG 677
E L R L +W+ +VP + K +I+ HG
Sbjct: 110 EGLSHLTSRLLKFWDEYVVPLQGKKKCVIVLCHG 143
>SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 282
Score = 35.1 bits (77), Expect = 0.010
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +3
Query: 102 SNKMPAKYKIVMIRHGESEWNQKNLFCG-WFDADLSDKGRQEAVAAGKALKAEGYQFDIA 278
S++ +K+ +++RH ESE N + + G D++L+ G +A K+++
Sbjct: 47 SSQNDSKFTCLLVRHAESEHNVRGIRAGARIDSELTVHGYNQAKKLAKSIR--NLDIVCV 104
Query: 279 HTSVLKRAQITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKAETA 425
++S KRA+ T I K + P+ + L E+ G L G + TA
Sbjct: 105 YSSPQKRAKRTAEEITK---VANCPLYISDFLMEKDLGSLEGTSFRYTA 150
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 81 SRYEIYLSNKMPAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEA 227
SR YLSN + I + RHGES++N + G D+ LS +G + A
Sbjct: 193 SRIVYYLSNLRTRRRSIWLSRHGESQFNVEGKIGG--DSSLSPQGLKYA 239
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 31.1 bits (67), Expect = 0.16
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 599 KNPALLEQCYCASDQRRQEDH-YCCPW 676
K+PA++EQC + Q DH YC PW
Sbjct: 133 KDPAVIEQCILSGVPPDQMDHVYCDPW 159
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 69 SVICSRYEIYLSNKMPAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKGRQE 224
S +CS YE+++ P+ IV H +E+ FC + A S+ G +E
Sbjct: 26 SPLCSEYELFIKELWPS---IVESFHNSTEFETAIRFCCYETARKSEIGLEE 74
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -3
Query: 497 FFHGRW-RNVEAAAPDLNLS--LPVFGSCLSLVQSSEATIMPLV 375
FF G W N A +N+ + VFGSCLS V SS I+P +
Sbjct: 349 FFQGLWFGNHLATTKRVNVGQVVTVFGSCLS-VASSLQQILPAI 391
>SPCC645.08c |snd1||RNA-binding protein Snd1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 878
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 488 GRWRNVEAAAPDLN-LSLPVFGSCLSLVQSSE 396
G W+N+ + PD+N LSL + + +S V S++
Sbjct: 308 GIWKNISVSIPDINSLSLKDYSAVVSRVISTD 339
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 671 GSNNDLLAFFDLRHNNIVPVRQGSFN 594
GSN DL + H ++VPV Q S +
Sbjct: 184 GSNKDLKPLVLMGHQDVVPVNQASLD 209
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 84 RYEIYLSNKMPAKYKIVMIRHGESEWNQKNLFCG 185
R+ Y +N + AKY ++ E NQKN+ G
Sbjct: 40 RFLNYDNNALEAKYNEIITEEVSQEPNQKNVIVG 73
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 543 ADPKPEEFPMYESLKLTIERTLPYWNNVIVPQIKEGK 653
A+P E P Y++L + T Y +P+ K+GK
Sbjct: 98 AEPIEESSPSYQALSSMAKDTKTYLFGGSIPERKDGK 134
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 582 LKLTIERTLPYWNNVIVPQIKEGKKIIIAAHGN 680
++L + +TLP+ N I+ +E K +I + GN
Sbjct: 1 MQLKLTKTLPFSENFIMADSEEYKTVIGISFGN 33
>SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 215
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 291 LKRAQITLNSILKEIGQPDIPVEKTWRLNERH 386
L R ++NS L IG+ + V W + +RH
Sbjct: 95 LSRVVDSVNSTLNNIGRGRLSVNGIWEIIDRH 126
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 468 FDVPPPAMEKDHPYYDTIVNDPRYAADPKPEEFPMYESLKLTIERTLP 611
FD PP A++ H Y +++ R A P F ++ + ++ P
Sbjct: 466 FDPPPSAVKTSHNYGLPFLSNQRCPATPTRNPFAFENTVSIHMDGRQP 513
>SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 25.4 bits (53), Expect = 7.9
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Frame = -2
Query: 432 IWQ-LSQPCSVQ*GHHNASRSISKF--------SQQVYLADRSPLR*SSV*SGHVLEQTC 280
+W+ ++ CS+ HH A +SI K+ +Q+ + LR SS S +L+Q
Sbjct: 2 VWRTIAGSCSLSAYHHTAKQSIDKYKSVLEEERKKQLLRTETGLLRQSSSRSSSLLDQRI 61
Query: 279 EQ--CQTDSLQLLKPYRQQQLLDDL 211
Q + ++ LL+ + LL ++
Sbjct: 62 RQITAKDKTVNLLRKTLNRPLLHEV 86
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 134 YDSSWRIRMEPEESLL 181
+D SW++R E ESLL
Sbjct: 15 FDKSWKVRFEAYESLL 30
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,755,697
Number of Sequences: 5004
Number of extensions: 55923
Number of successful extensions: 156
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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