Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5h18
(646 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1465 - 26729872-26730909 41 0.001
09_04_0410 + 17362751-17363698 40 0.002
09_04_0413 + 17372852-17373787 39 0.003
09_04_0411 + 17366559-17367497 39 0.003
07_03_1469 - 26742772-26743848 38 0.007
09_04_0412 + 17369935-17370873 37 0.016
08_02_0997 + 23409932-23410894 36 0.036
09_04_0409 + 17359459-17360622 35 0.064
08_02_1485 - 27466761-27467753 34 0.084
09_04_0421 + 17417851-17418840 34 0.11
03_06_0249 + 32638112-32639140 34 0.11
08_02_0995 - 23401390-23402379 33 0.15
01_01_0379 - 2956396-2957409 33 0.15
07_03_1467 - 26736859-26736868,26737769-26738439 33 0.19
07_03_1464 + 26726527-26727552 33 0.19
01_06_1701 - 39290537-39291077,39292110-39292801 33 0.19
05_04_0292 + 19893895-19894983 32 0.34
08_02_0994 - 23395808-23396920 32 0.45
07_03_0651 + 20287661-20287701,20288034-20288124,20288737-202888... 31 1.0
07_01_0446 - 3371829-3372132,3374691-3375673 30 1.4
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 30 1.4
04_04_0052 + 22386553-22387506 30 1.8
09_04_0240 + 15958110-15958305,15959586-15960763 29 2.4
12_01_0904 + 8791474-8792261,8792935-8793037,8794009-8794055,879... 29 3.2
07_01_0448 - 3383706-3384761 29 3.2
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 29 4.2
09_04_0419 + 17411172-17411282,17412634-17413788 28 5.5
09_04_0417 + 17404433-17405392 28 5.5
07_03_1468 - 26739872-26740912 28 5.5
06_01_1195 + 10280864-10280979,10281024-10281115,10281211-102821... 28 5.5
06_01_0780 + 5824367-5825335 27 9.7
03_05_0316 - 23045214-23045261,23045322-23045400,23045548-230457... 27 9.7
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 27 9.7
>07_03_1465 - 26729872-26730909
Length = 345
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENGPDFLIEH 470
D+ ++ASRG L+ VF P + LP +V HGGGFVL + + + I
Sbjct: 65 DVTIDASRG----LWARVFCPPTNTAAVKLPVVVYFHGGGFVLFSAASRPYDALCRRISR 120
Query: 471 DV--VVVFINYRL 503
V VVV +NYRL
Sbjct: 121 GVGAVVVSVNYRL 133
>09_04_0410 + 17362751-17363698
Length = 315
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENG--PDFLI 464
D+ ++A G LYL PK+ K LP +V HGGGF++ + T + F
Sbjct: 49 DVVIDAGTGLSVRLYL----PKIQEPSKKLPVLVFFHGGGFLIESADSSTYHNYVNPFAA 104
Query: 465 EHDVVVVFINYRL 503
VVVV ++YRL
Sbjct: 105 AAGVVVVSVDYRL 117
>09_04_0413 + 17372852-17373787
Length = 311
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENG--PDFLI 464
D+ ++A G L + VF P P K LP +V HGG FV+ + T +G
Sbjct: 47 DVVVDADTG----LSVRVFLPARPDPSKKLPVLVFFHGGAFVIESAFSTTYHGYAASLAA 102
Query: 465 EHDVVVVFINYRL 503
VV V + YRL
Sbjct: 103 AAGVVAVSVEYRL 115
>09_04_0411 + 17366559-17367497
Length = 312
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCD--KLLPTMVSIHGGGFVLGNGIIKTENG--PDF 458
D+ L+A G L++ VF PK+ + K LP +V HGGGF++ + T +
Sbjct: 46 DVVLDAGTG----LFVRVFLPKVQDQETGKKLPVLVYFHGGGFIIESADSATYHNYLNSV 101
Query: 459 LIEHDVVVVFINYRLGAFGFLSLDIPEAAGNMGLKDQVMALKW 587
V+VV +NYRL PE G D AL+W
Sbjct: 102 AAAAGVLVVSVNYRLA---------PENPLPAGYDDSWAALQW 135
>07_03_1469 - 26742772-26743848
Length = 358
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 288 FDIFLNASRGSEDCLYLNVFTPKLPS-CDKLLPTMVSIHGGGFVLGNGIIKTENGPDFLI 464
FD ++A+RG L+ VF P + +P MV HGGGF L + + +G +
Sbjct: 77 FDFTIDAARG----LWARVFAPAAAAQAAAPMPVMVYYHGGGFALFSPAVAPFDGVCRRL 132
Query: 465 EHD--VVVVFINYRL 503
D VVVV +NYRL
Sbjct: 133 CGDVGVVVVSVNYRL 147
>09_04_0412 + 17369935-17370873
Length = 312
Score = 36.7 bits (81), Expect = 0.016
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCD--KLLPTMVSIHGGGFVLGNGIIKTENG--PDF 458
D+ L+A G L++ VF PK+ + K LP +V HGGGF++ + T +
Sbjct: 46 DVVLDAGTG----LFVRVFLPKVQDQELGKKLPVLVYFHGGGFIIESADSATYHNYLNSA 101
Query: 459 LIEHDVVVVFINYRLGAFGFLSLDIPEAAGNMGLKDQVMALKW 587
V+VV ++YRL PE G D AL+W
Sbjct: 102 AAAAGVLVVSVDYRLA---------PENPLPAGYDDSWAALQW 135
>08_02_0997 + 23409932-23410894
Length = 320
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 330 LYLNVFTPKLPSCD-KLLPTMVSIHGGGFVLGNGIIKTENG--PDFLIEHDVVVVFINYR 500
L+ ++ P L + KLLP +V +HGGG V+G+ E+G +VV ++YR
Sbjct: 56 LWARLYLPDLDGGERKLLPVVVYLHGGGLVVGSAADALEHGFANRLCARARALVVSVDYR 115
Query: 501 L 503
L
Sbjct: 116 L 116
>09_04_0409 + 17359459-17360622
Length = 387
Score = 34.7 bits (76), Expect = 0.064
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENG--PDFLI 464
D+ L+A G + + +F PKL K LP +V HGG F + + +T +
Sbjct: 123 DVVLDADTG----VSVRLFLPKLQEPSKKLPVVVFFHGGAFFIESAGSETYHNYVNSLAA 178
Query: 465 EHDVVVVFINYRLGAFGFLSLDIPEAAGNMGLKDQVMALKW 587
V+VV ++YRL PE G D AL+W
Sbjct: 179 AAGVLVVSVDYRLA---------PEHPLPAGYDDSWAALQW 210
>08_02_1485 - 27466761-27467753
Length = 330
Score = 34.3 bits (75), Expect = 0.084
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYL-NVFTPKLPSCDKLLPTMVSIHGGGFVL-GNGIIKTENGPDFLI 464
D+ L+AS + LYL N +P P KL P ++ HGGGFVL G + + +
Sbjct: 50 DVPLDASLATSLRLYLPNPASPPPPPTSKL-PVILYFHGGGFVLFSTGSVFYHASCEAMA 108
Query: 465 EH-DVVVVFINYRLGAFGFLSLDIPEAAGN-MGLKDQVMALKWV 590
+VV ++YRL L +AA + L+D W+
Sbjct: 109 AAVPAIVVSLDYRLAPEHRLPAAYDDAASAVLWLRDAAAGDPWI 152
>09_04_0421 + 17417851-17418840
Length = 329
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 324 DCLYLNVFTPKLPSCD--KLLPTMVSIHGGGFVLGNGIIKTENG--PDFLIEHDVVVVFI 491
D + ++ P P+ + LP +V HGGGF LG+ +G V+VV +
Sbjct: 59 DGVSARIYLPSTPASGYGRRLPVLVFFHGGGFCLGSAFDAATHGHANRLAARAGVIVVSV 118
Query: 492 NYRL 503
YRL
Sbjct: 119 EYRL 122
>03_06_0249 + 32638112-32639140
Length = 342
Score = 33.9 bits (74), Expect = 0.11
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPS-CDKLLPTMVSIHGGGFVLGNGIIKTENGPDFLIE 467
D+ +A RG L L V+ P + + LP +V HGGG+ +G+ + + +
Sbjct: 51 DVVYDAGRG----LKLRVYRPPAATVAGEKLPVLVYFHGGGYFIGSFEMDNFHACCLRLA 106
Query: 468 HDV--VVVFINYRLGAFGFLSLDIPEAAGNMG-LKDQVMA 578
H++ VV+ +YRL L +AA M ++DQ +A
Sbjct: 107 HELPAVVLSADYRLAPEHRLPAAHDDAATAMSWVRDQAVA 146
>08_02_0995 - 23401390-23402379
Length = 329
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPK-LPSCDKLLPTMVSIHGGGFVLGNGIIKTENG--PDFL 461
D+ ++A G L ++ P +P C+KL P +V HGGGFV+ + + + +
Sbjct: 46 DVVIDAQSGG---LAARLYLPGGVPRCEKL-PVVVYFHGGGFVVHSAFSRVHSRFLNALV 101
Query: 462 IEHDVVVVFINYRL 503
VV V ++YRL
Sbjct: 102 AAAGVVAVSVDYRL 115
>01_01_0379 - 2956396-2957409
Length = 337
Score = 33.5 bits (73), Expect = 0.15
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENGPDF---- 458
D+ +A+ G L L V+ P + LP +V HGGG+ LG T P F
Sbjct: 55 DLVYDATHG----LKLRVYRPPTAGDAERLPVLVCFHGGGYCLG-----TFEKPSFHCCC 105
Query: 459 ---LIEHDVVVVFINYRLGAFGFLSLDIPEAAGNMG-LKDQVMA 578
E VV+ +YRLG L I + A + L+DQ M+
Sbjct: 106 QRLASELRAVVLSADYRLGPEHRLPAAIDDGAAVLSWLRDQAMS 149
>07_03_1467 - 26736859-26736868,26737769-26738439
Length = 226
Score = 33.1 bits (72), Expect = 0.19
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCDKL--LPTMVSIHGGGFVLGNGIIKTENG--PDF 458
D+ ++ASRG L+ VF+P S + LP +V HGGGF L +
Sbjct: 74 DVTVDASRG----LWARVFSPASSSAVESPPLPVVVYFHGGGFALLTAASSQYDALCRRL 129
Query: 459 LIEHDVVVVFINYRL 503
E VVV +NYRL
Sbjct: 130 CRELRAVVVSVNYRL 144
>07_03_1464 + 26726527-26727552
Length = 341
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCD--KLLPTMVSIHGGGFVLGNGIIKTENGPDFLI 464
D+ ++ASRG L+ VF+P + + LP +V HGGGFVL + + I
Sbjct: 55 DVTIDASRG----LWARVFSPPPTKGEAAQALPVVVFFHGGGFVLFSAASCYYDRLCRRI 110
Query: 465 --EHDVVVVFINYRL 503
E VVV +NYRL
Sbjct: 111 CRELRAVVVSVNYRL 125
>01_06_1701 - 39290537-39291077,39292110-39292801
Length = 410
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Frame = +3
Query: 363 SCDKLLPTMVSIHGGGFVLGNGIIKTENGPDFLIEH--DVVVVFINYRLGAFGFLSLDIP 536
S + LP +V HGGGFV G+ + + D +VV + YRL P
Sbjct: 127 SARRRLPIVVQFHGGGFVSGSSSSAANDAFCRRVAKMCDAIVVAVGYRLA---------P 177
Query: 537 EAAGNMGLKDQVMALKWV--QENIQQFCGNKDSVTIFG 644
E+ D V L+W+ Q N+ V FG
Sbjct: 178 ESRYPAAFDDGVRVLRWIAKQANLAMMSKVGGGVDTFG 215
>05_04_0292 + 19893895-19894983
Length = 362
Score = 32.3 bits (70), Expect = 0.34
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 336 LNVFTPKLPSCDKLLPTMVSIHGGGFVLGN 425
L V+ P++ ++ LP +V +HGGGF + +
Sbjct: 83 LRVYLPEVALAERRLPVVVQLHGGGFCISH 112
>08_02_0994 - 23395808-23396920
Length = 370
Score = 31.9 bits (69), Expect = 0.45
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Frame = +3
Query: 258 SVNPNNVCFQFDIFLNASRGSEDCLYL----NVFTPKLPSCDKLLPTMVSIHGGGFVLGN 425
S++P D+ ++A G LYL N+ K DKL P +V HGGGFV +
Sbjct: 69 SMDPATGVASKDVVIDADAGLAVRLYLPNVANLTAGKRGGGDKL-PVVVFYHGGGFVTES 127
Query: 426 GIIKTENG--PDFLIEHDVVVVFINYRLGAFGFLSLDIPEAAGNMGLKDQVMALKWVQEN 599
T + + + VV V + Y L PE D AL+WV EN
Sbjct: 128 AFSPTYHRYLNALVSKARVVAVSVEYHLA---------PEHRLPRAYDDAWAALRWVLEN 178
>07_03_0651 +
20287661-20287701,20288034-20288124,20288737-20288831,
20289433-20289523,20290066-20290250,20290590-20290647,
20290812-20290852,20290935-20291009,20292298-20292354,
20292480-20292546,20292754-20292900,20292986-20293210,
20293332-20293493,20293570-20293647,20293735-20293812
Length = 496
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 343 FLHQNCHLVINFFQPWCPYTEEVL-SWE 423
+ HQ LV+NF+ PWC ++ + SWE
Sbjct: 165 YSHQYPVLVVNFYAPWCYWSNRLKPSWE 192
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 369 DKLLPTMVSIHGGGFVLGNGIIKTENGPDFLI--EHDVVVVFINYRLGAFGFLSLDIPEA 542
++ LP +V HGGGF +G+ + + E VV+ +YRL L +A
Sbjct: 78 EEKLPVVVYFHGGGFCIGSCTWPNFHAGCLRLAAELPAVVLSFDYRLAPEHRLPAAHEDA 137
Query: 543 AGNM-GLKDQVMALKWVQE 596
A + L+DQ+++ W+ +
Sbjct: 138 AAALIWLRDQLLSDPWLAD 156
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 426 GIIKTENGPDFLIEHDVVVVFINYRLGA 509
G I P+FL HD + + ++YRLGA
Sbjct: 4411 GQILVAEPPNFLTIHDAIAIVVSYRLGA 4438
>04_04_0052 + 22386553-22387506
Length = 317
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 378 LPTMVSIHGGGFVLGNGIIKTENG--PDFLIEHDVVVVFINYRLGAFGFLSLDIPEAAGN 551
LP +V HGGGFV+G+ + D V V ++YRL PE
Sbjct: 76 LPVVVYFHGGGFVIGSAASPAYHRCLNDLAAACPAVAVSVDYRLA---------PEHPLP 126
Query: 552 MGLKDQVMALKWV 590
+D AL WV
Sbjct: 127 AAYEDSAAALAWV 139
>09_04_0240 + 15958110-15958305,15959586-15960763
Length = 457
Score = 29.5 bits (63), Expect = 2.4
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = +3
Query: 204 RFKSPQPPE-SWEHERDATSVNPNNVCFQFDIFLNASRGSEDCLYLNV-FTPKLPSCDKL 377
RF +P+ SW RD T + N V + D+ ++ G ++L V + +
Sbjct: 58 RFGAPERVGGSWCATRDKTR-SGNGVATK-DVVIDDETGVSVRVFLPVDAAAAAAAAGRR 115
Query: 378 LPTMVSIHGGGFVLGNGIIKT--ENGPDFLIEHDVVVVFINYRL 503
LP +V +HGG F G+ + + VVV ++YRL
Sbjct: 116 LPLVVYVHGGAFCTGSASARMFHDYAESLSARAAAVVVSVDYRL 159
>12_01_0904 +
8791474-8792261,8792935-8793037,8794009-8794055,
8795180-8795717
Length = 491
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +3
Query: 378 LPTMVSIHGGGFVLGNGIIKTENGPDFLIEH--DVVVVFINYRLGAFGFLSLDIPEAAGN 551
LP +V HGG F G + + D +VV + YRL PE+
Sbjct: 158 LPVIVQFHGGAFATGAADSAANDAFCRRVARLCDAIVVAVGYRLA---------PESRYP 208
Query: 552 MGLKDQVMALKWV--QENIQQFCG 617
+D V LKW+ Q N+ CG
Sbjct: 209 AAFEDGVTVLKWIAKQANLAA-CG 231
>07_01_0448 - 3383706-3384761
Length = 351
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 378 LPTMVSIHGGGFVLGNGIIKTENGPDFLIEHD--VVVVFINYRLGAFGFLSLDIPEAAG 548
LP +V HGGGF LG+ + + D VV+ YRL L + +AAG
Sbjct: 91 LPVLVYFHGGGFCLGSCTWANVHSFCLRLAADAGAVVLSAGYRLAPEHRLPAAVDDAAG 149
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = +3
Query: 387 MVSIHGGGFVLGNGIIKTENGPDFLIEHDVVVVFINYRLGAFGFLSLDIPEAAGNMGLKD 566
++ + GF G ++G L +V IN+ +GA G +S++ + + G D
Sbjct: 263 LIDDYSTGFCSGGCAAIADSGTSLLGGPTTIVAQINHAIGAEGIVSMECKQVVRDYG--D 320
Query: 567 QVMALKWVQENIQQFC 614
++ + Q + + C
Sbjct: 321 MILEMLIAQASPMKLC 336
>09_04_0419 + 17411172-17411282,17412634-17413788
Length = 421
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +3
Query: 378 LPTMVSIHGGGFVLGNGIIKTENGPDFL----IEHDVVVVFINYRLGAFGFLSLDIPEAA 545
LP +V HGG FV+ + T D+L + VV V ++YRL PE
Sbjct: 173 LPVLVFFHGGAFVIESAF--TAKYHDYLNKVTAKARVVAVSVDYRLA---------PEHP 221
Query: 546 GNMGLKDQVMALKWVQEN 599
D AL WV +N
Sbjct: 222 VPTAYDDSWQALNWVAKN 239
>09_04_0417 + 17404433-17405392
Length = 319
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCD-KLLPTMVSIHGGGFVLGNGIIKTENG--PDFL 461
D+ ++ + G LY+ P K LP +V HGGG VL + T + +
Sbjct: 46 DVVIDDATGVSARLYIPDLPASGPGHHRKKLPIVVYFHGGGMVLDSAASPTYHRYLNSLV 105
Query: 462 IEHDVVVVFINYRL 503
+ + V +NYRL
Sbjct: 106 SKAGALAVSVNYRL 119
>07_03_1468 - 26739872-26740912
Length = 346
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = +3
Query: 291 DIFLNASRGSEDCLYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENGPDFLIEH 470
DI ++ASRG L+ VF PS P +V HGGGF L + + +
Sbjct: 65 DITVDASRG----LWARVFYSPSPSPR---PVVVYFHGGGFTLFSAASRAYDA--LCRTL 115
Query: 471 DVVVVFINYRL 503
VVV ++YRL
Sbjct: 116 CAVVVSVDYRL 126
>06_01_1195 +
10280864-10280979,10281024-10281115,10281211-10282156,
10282378-10283075,10283140-10284068
Length = 926
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -1
Query: 397 MDTMVGRSLSQ-DGSF-GVKTLRYRQSSLPLEALRKISN*KQTLFGFTEVASLSCSQDSG 224
++ +G+ L G F G+KTLR LE LRK++ ++T + CS +
Sbjct: 775 LNAYIGKELVLCHGKFRGLKTLRLDS----LEELRKVTFEERTSPKLETITIQDCSSELA 830
Query: 223 GCGLLNLNS 197
CG NL S
Sbjct: 831 VCGTANLQS 839
>06_01_0780 + 5824367-5825335
Length = 322
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 330 LYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENG--PDFLIEHDVVVVFINYRL 503
L + ++ P + + LP +V HGGGF++ + T + VV V + YRL
Sbjct: 59 LSVRLYLPPAVAAGERLPILVYFHGGGFMVESATSPTYHRYLNALASRARVVAVSVEYRL 118
>03_05_0316 -
23045214-23045261,23045322-23045400,23045548-23045707,
23046937-23047006,23047439-23048017
Length = 311
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 438 TENGPDFLIEHDVVVVFINYRLGAFGFLSLDIPEAAGNMGLK 563
T++GPD + H V+ Y L +LDI A G+ G K
Sbjct: 56 TQSGPDLSLPHHVLFQHFRYGLDKDSAANLDI-SAGGSFGHK 96
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 27.5 bits (58), Expect = 9.7
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = +3
Query: 303 NASRGSEDCLYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENGPDFLIEHDV-- 476
+ S+G E +++ ++ +L CD L M+S + ++ N ++K +N D +E DV
Sbjct: 78 DCSKGQEH-VFVRSYSDRLLKCDLTLD-MLSENEKIKIIEN-LVKIQN--DGTLEVDVKR 132
Query: 477 --VVVFINYRLGAFGFLSLDIPEAAGNMGLKDQVMALKWV 590
++ + AFG LS DI EAA GL V LK V
Sbjct: 133 SALIASELSEIDAFGSLSRDIVEAA--PGLSKSVPKLKIV 170
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,537,486
Number of Sequences: 37544
Number of extensions: 440378
Number of successful extensions: 1200
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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