Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5g20
         (666 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73426-2|CAA97794.1|  119|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AL031630-10|CAA20990.1|  363|Caenorhabditis elegans Hypothetical...    30   1.7  
Z81105-4|CAB03219.1|  299|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U28729-6|AAA68292.1|  549|Caenorhabditis elegans Phosphodiestera...    29   3.9  
U28729-5|AAO38607.1|  674|Caenorhabditis elegans Phosphodiestera...    29   3.9  
U28729-4|AAN60496.1|  599|Caenorhabditis elegans Phosphodiestera...    29   3.9  
U28729-3|AAO38608.1|  612|Caenorhabditis elegans Phosphodiestera...    29   3.9  
U28729-2|AAK77625.1|  626|Caenorhabditis elegans Phosphodiestera...    29   3.9  
U28729-1|ABB88209.1|  673|Caenorhabditis elegans Phosphodiestera...    29   3.9  
Z81470-3|CAB03880.1|  401|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z97628-3|CAB10727.1|  819|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z79755-13|CAB02114.1|  819|Caenorhabditis elegans Hypothetical p...    28   6.8  
U64855-2|AAB04981.2| 1080|Caenorhabditis elegans Importin beta f...    27   9.1  

>Z73426-2|CAA97794.1|  119|Caenorhabditis elegans Hypothetical
           protein F40F11.3 protein.
          Length = 119

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +3

Query: 303 SIGEIRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVNLLGIFKLEYNQGIFLQESRQC 482
           +I  ++    V  IE + L+K+ E+IA   N  ++ +   +  F  E N  +    +RQ 
Sbjct: 32  AIEHVKDSKLVHRIENEMLVKVDEIIASSANLTQEEIQRKMKDFMNE-NAKMRNDINRQI 90

Query: 483 HVE-RLEWCIDRLN-TIDQHLEKR 548
            VE   EW  D L+  ID+ + K+
Sbjct: 91  RVEFEKEWVHDELDKEIDEKVNKQ 114


>AL031630-10|CAA20990.1|  363|Caenorhabditis elegans Hypothetical
           protein Y38H6C.11 protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +3

Query: 327 LQVKHIEEQELI-KIREVIALCCNQIKKCVVNLLGIFKLEYNQGIFLQESRQCHVERLEW 503
           L +  +E+ E+I K RE+   C     K +  LL  F++EY + I ++       ++L+ 
Sbjct: 150 LLISELEKSEIIIKAREIAIDCNESTSKWIQKLLSRFEMEYLEKITMKSLSGKVFDKLKI 209

Query: 504 C--IDRLNTIDQHLEK 545
                R  ++D H +K
Sbjct: 210 TDHFKRAKSLDLHAKK 225


>Z81105-4|CAB03219.1|  299|Caenorhabditis elegans Hypothetical
           protein R05D7.4 protein.
          Length = 299

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +3

Query: 336 KHIEEQELIKIREVIALCCNQIKKCVVNL-LGIFKLEYNQGIF--LQESRQCHVERLEWC 506
           +H+E +ELIK    + LC  + K+ + +L   I  L   Q I   LQ S + +  ++EW 
Sbjct: 159 RHLEFRELIKTMRNVDLCRTR-KEILKDLESAIPDLAMRQFILTNLQPSSE-NEGQMEWK 216

Query: 507 IDRLNTIDQHLEK 545
           I+ +NTID H+++
Sbjct: 217 IN-INTIDSHVDE 228


>U28729-6|AAA68292.1|  549|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoforma protein.
          Length = 549

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 486 VERLEWCIDRLNTIDQH 536
           +E L+WC+D+L TI  H
Sbjct: 90  LEELDWCLDQLETIQTH 106


>U28729-5|AAO38607.1|  674|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformd protein.
          Length = 674

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 486 VERLEWCIDRLNTIDQH 536
           +E L+WC+D+L TI  H
Sbjct: 215 LEELDWCLDQLETIQTH 231


>U28729-4|AAN60496.1|  599|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformc protein.
          Length = 599

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 486 VERLEWCIDRLNTIDQH 536
           +E L+WC+D+L TI  H
Sbjct: 140 LEELDWCLDQLETIQTH 156


>U28729-3|AAO38608.1|  612|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoforme protein.
          Length = 612

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 486 VERLEWCIDRLNTIDQH 536
           +E L+WC+D+L TI  H
Sbjct: 153 LEELDWCLDQLETIQTH 169


>U28729-2|AAK77625.1|  626|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformb protein.
          Length = 626

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 486 VERLEWCIDRLNTIDQH 536
           +E L+WC+D+L TI  H
Sbjct: 167 LEELDWCLDQLETIQTH 183


>U28729-1|ABB88209.1|  673|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformg protein.
          Length = 673

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 486 VERLEWCIDRLNTIDQH 536
           +E L+WC+D+L TI  H
Sbjct: 214 LEELDWCLDQLETIQTH 230


>Z81470-3|CAB03880.1|  401|Caenorhabditis elegans Hypothetical
           protein C14A6.3 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 372 EVIALCCNQIKKCVVNLLGIFKL 440
           E I LCCN I +  VNL  I +L
Sbjct: 243 EKITLCCNSIPEITVNLTSILEL 265


>Z97628-3|CAB10727.1|  819|Caenorhabditis elegans Hypothetical
           protein F43G9.12 protein.
          Length = 819

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 177 KTIERN*ENNEHKMHKIKFELPDNSGESTKY 269
           + +E+N E N+  + KI+ ELP+ S + T Y
Sbjct: 363 RKLEQNIEENKSMIAKIEMELPNQSTKYTMY 393


>Z79755-13|CAB02114.1|  819|Caenorhabditis elegans Hypothetical
           protein F43G9.12 protein.
          Length = 819

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 177 KTIERN*ENNEHKMHKIKFELPDNSGESTKY 269
           + +E+N E N+  + KI+ ELP+ S + T Y
Sbjct: 363 RKLEQNIEENKSMIAKIEMELPNQSTKYTMY 393


>U64855-2|AAB04981.2| 1080|Caenorhabditis elegans Importin beta
           family protein 4,isoform a protein.
          Length = 1080

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/50 (24%), Positives = 29/50 (58%)
 Frame = +3

Query: 270 LITLLIKEIHPSIGEIRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVN 419
           +++LL +E+     +   + + +H+++Q   + +EV  LC + ++KC  N
Sbjct: 169 ILSLLSEEVFDFGSQNLTQAKEQHLKQQFCGQFQEVFTLCVSILEKCPSN 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,908,631
Number of Sequences: 27780
Number of extensions: 270708
Number of successful extensions: 681
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)