Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5g17
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 189 1e-48
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 189 1e-48
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 120 1e-27
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 31 1.1
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 31 1.1
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 30 1.4
AL132902-6|CAC14421.1| 316|Caenorhabditis elegans Hypothetical ... 29 3.2
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 29 4.3
AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 29 4.3
Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 28 7.4
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 28 7.4
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 28 7.4
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL023838-2|CAA19505.1| 452|Caenorhabditis elegans Hypothetical ... 27 9.8
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 189 bits (461), Expect = 1e-48
Identities = 93/201 (46%), Positives = 133/201 (66%), Gaps = 4/201 (1%)
Frame = +2
Query: 110 LQMTLASVFSIISHRYTRAERDLKAARPYGEGAVQFYER----AEVTPPEDDPKQLFVAM 277
+Q S+ + + +Y +AER+LK AR YG GA F++ E ++ KQ+ V +
Sbjct: 41 IQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLI 100
Query: 278 TSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGR 457
TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR LQRLY I+ NEIGR
Sbjct: 101 TSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAGLQRLYANSILLSGNEIGR 160
Query: 458 LPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAY 637
PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S L + ++I++ L+ Y
Sbjct: 161 APPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSKLQILPLEAIKAKEALSTY 220
Query: 638 DSLDSDVLQSYTEFSLASLLF 700
DS+D DVLQSY+E+SLA L++
Sbjct: 221 DSVDDDVLQSYSEYSLAQLIY 241
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 189 bits (461), Expect = 1e-48
Identities = 93/201 (46%), Positives = 133/201 (66%), Gaps = 4/201 (1%)
Frame = +2
Query: 110 LQMTLASVFSIISHRYTRAERDLKAARPYGEGAVQFYER----AEVTPPEDDPKQLFVAM 277
+Q S+ + + +Y +AER+LK AR YG GA F++ E ++ KQ+ V +
Sbjct: 41 IQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLI 100
Query: 278 TSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGR 457
TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR LQRLY I+ NEIGR
Sbjct: 101 TSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAGLQRLYANSILLSGNEIGR 160
Query: 458 LPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAY 637
PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S L + ++I++ L+ Y
Sbjct: 161 APPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSKLQILPLEAIKAKEALSTY 220
Query: 638 DSLDSDVLQSYTEFSLASLLF 700
DS+D DVLQSY+E+SLA L++
Sbjct: 221 DSVDDDVLQSYSEYSLAQLIY 241
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 120 bits (288), Expect = 1e-27
Identities = 61/136 (44%), Positives = 84/136 (61%), Gaps = 4/136 (2%)
Frame = +2
Query: 110 LQMTLASVFSIISHRYTRAERDLKAARPYGEGAVQFYER----AEVTPPEDDPKQLFVAM 277
+Q S+ + + +Y +AER+LK AR YG GA F++ E ++ KQ+ V +
Sbjct: 41 IQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLI 100
Query: 278 TSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGR 457
TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR LQRLY I+ NEIGR
Sbjct: 101 TSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAGLQRLYANSILLSGNEIGR 160
Query: 458 LPPTFLDASQLATAIL 505
PP+F DAS A AIL
Sbjct: 161 APPSFADASIAAKAIL 176
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 503 LTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL-TAYDSLDSDVLQSYTEF 679
+ GYEFGS +I N+ + ++ + ++ + + SK A + SD LQ YT
Sbjct: 482 IVGGYEFGSDEIDKNRMEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYTHL 541
Query: 680 SLASLLF 700
L+F
Sbjct: 542 MTTPLVF 548
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 503 LTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL-TAYDSLDSDVLQSYTEF 679
+ GYEFGS +I N+ + ++ + ++ + + SK A + SD LQ YT
Sbjct: 482 IVGGYEFGSDEIDKNRMEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYTHL 541
Query: 680 SLASLLF 700
L+F
Sbjct: 542 MTTPLVF 548
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -2
Query: 463 WETSDLI-SNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVY-SSAQT 290
W+T I T + V++ + + L +E + D+FG+T V+ +SA T
Sbjct: 71 WDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSAST 130
Query: 289 SVRGHSNK 266
V HSNK
Sbjct: 131 LVAKHSNK 138
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -2
Query: 463 WETSDLI-SNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVY-SSAQT 290
W+T I T + V++ + + L +E + D+FG+T V+ +SA T
Sbjct: 71 WDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSAST 130
Query: 289 SVRGHSNK 266
V HSNK
Sbjct: 131 LVAKHSNK 138
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 176 LKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR 334
L RP+ + + + E +P DP F+ ++ D + GA G S IR
Sbjct: 63 LSKNRPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115
>AL132902-6|CAC14421.1| 316|Caenorhabditis elegans Hypothetical
protein Y71A12B.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 531 ERSFTTSSSLWSRTPSPTCP 590
E T S+SLW+ TP P CP
Sbjct: 124 EFDITVSNSLWTFTPVPACP 143
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 478 VQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHL-DVLSTRFAETVADHFGY 317
V +S DL +NT+ + S + T + T+ D S R T+ D FGY
Sbjct: 2425 VLKSSISLDDLFNNTSGIEKTTSEKTTTTTTTRTETTTDTYSKRSTSTLVDRFGY 2479
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 478 VQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHL-DVLSTRFAETVADHFGY 317
V +S DL +NT+ + S + T + T+ D S R T+ D FGY
Sbjct: 2425 VLKSSISLDDLFNNTSGIEKTTSEKTTTTTTTRTETTTDTYSKRSTSTLVDRFGY 2479
>AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical
protein Y44F5A.1 protein.
Length = 383
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +2
Query: 374 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 499
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein.
Length = 383
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +2
Query: 374 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 499
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical
protein C54G4.2 protein.
Length = 423
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 496 SGQLTCVQESRWETSDLISNTNDVLSVQSLQDTARFISH 380
S +T ES +TSDLIS+ D + +F+SH
Sbjct: 64 SASITPSTESTMKTSDLISSIGDHTEGEPSNGNTKFVSH 102
>Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical
protein T01B7.6 protein.
Length = 765
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -3
Query: 393 DLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGVTSALS 220
D T M + G LR + TPV +PL +N LGSS G ++S S
Sbjct: 544 DFKMTSSIPMTNGLGHLRLGSVWSGTPVEAKQEEPLHYFQQQDNFLGSSFGPISSTFS 601
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 461 PPTFLDASQLATAILTSGYEFGSGKI 538
PPTF D + A + GY FG KI
Sbjct: 3 PPTFADLGKSAKDLFNKGYNFGFLKI 28
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 251 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 364
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 251 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 364
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>AL023838-2|CAA19505.1| 452|Caenorhabditis elegans Hypothetical
protein Y43C5A.2 protein.
Length = 452
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 411 DCTESTSLVLLMRSDVSHLLSWTQVSWPLLSSPRDTSLVPERSFTTSSSLWSRTPSPTCP 590
D T+ST + S L + ++W SP T+ PE + T S P T P
Sbjct: 133 DTTQSTGVYSYTHQRDSTLSTTISIAWSTNISPPSTTSTPEPTTTEVPFTGSTLPPTTTP 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,102,081
Number of Sequences: 27780
Number of extensions: 340938
Number of successful extensions: 1011
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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