Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5g15
         (666 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0548 + 22004338-22006746                                         31   0.82 
05_06_0172 + 26138238-26138474,26138712-26139854                       29   4.4  

>06_03_0548 + 22004338-22006746
          Length = 802

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -3

Query: 655 TNPGDQYYKKLCTIFDKHFMVC*LTK*KRCE*MK*NFCFEYYGFLHFSFLNQIALVI 485
           + P DQ Y K CT  DK+F+   L K K  +    +  + +YGFL   F+ ++  +I
Sbjct: 418 SQPFDQKYVKYCTTVDKYFVPDFLDKLKSGQ--NESKYWYFYGFLSAIFVVEVLFII 472


>05_06_0172 + 26138238-26138474,26138712-26139854
          Length = 459

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 464 DATSKRHERPSHARGHQRGVSALCPDDESNHAPFKPSLD 348
           DA +   E  SH  G     +A+CP +E N AP +  +D
Sbjct: 276 DACTAAEEMYSHGHGGTEPSTAICP-EEMNTAPMETGID 313


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,391,784
Number of Sequences: 37544
Number of extensions: 279178
Number of successful extensions: 508
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)