Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5g11
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    24   1.2  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    24   1.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   2.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.2  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   6.2  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   6.2  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   6.2  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   6.2  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   6.2  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 258 NNLTRKYDSLKPNFIRNLEQI 320
           NN    Y  L  N+I N+EQI
Sbjct: 107 NNYNNNYKKLYKNYIINIEQI 127


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 258 NNLTRKYDSLKPNFIRNLEQI 320
           NN    Y  L  N+I N+EQI
Sbjct: 107 NNYNNNYKKLYKNYIINIEQI 127


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +3

Query: 189 FPVDAPQPNINQISLAGTIPEITNNLTRKYDSLKPNFIRNL 311
           FP     PN N ++  G +P++  NLT+     + + I  +
Sbjct: 92  FPALLKDPNGNVVARNGGVPQL-GNLTKHLQVFRDHLINQI 131


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 167 STYRYHTLPCGRTAT*H 217
           STY   T PCG T T H
Sbjct: 330 STYFTFTRPCGITLTFH 346


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 463 RNL*PKGKKQSLPKTSTIIKS 401
           R L PKGKK+ +P    ++ S
Sbjct: 601 RLLLPKGKKEGMPYNVLVVVS 621


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 463 RNL*PKGKKQSLPKTSTIIKS 401
           R L PKGKK+ +P    ++ S
Sbjct: 601 RLLLPKGKKEGMPYNVLVVVS 621


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 284 FEAELHPQFGTNHQ 325
           F   L+P+FG+ HQ
Sbjct: 395 FRPSLNPRFGSTHQ 408


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 284 FEAELHPQFGTNHQ 325
           F   L+P+FG+ HQ
Sbjct: 395 FRPSLNPRFGSTHQ 408


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 284 FEAELHPQFGTNHQ 325
           F   L+P+FG+ HQ
Sbjct: 395 FRPSLNPRFGSTHQ 408


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 284 FEAELHPQFGTNHQ 325
           F   L+P+FG+ HQ
Sbjct: 395 FRPSLNPRFGSTHQ 408


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 284 FEAELHPQFGTNHQ 325
           F   L+P+FG+ HQ
Sbjct: 384 FRPSLNPRFGSTHQ 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,781
Number of Sequences: 438
Number of extensions: 4215
Number of successful extensions: 67
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)