Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5g10
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 33 0.056
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 0.30
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 29 0.69
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 29 0.69
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 28 1.2
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 28 1.6
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 28 1.6
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 27 2.1
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 27 3.7
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 4.9
SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase ... 26 4.9
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 26 4.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 6.4
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 25 8.5
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 25 8.5
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 32.7 bits (71), Expect = 0.056
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 361 SQYPTAQSQGTESPGSPNIFEEPEQSF--AAAENDNHIDLPSTSRSHDHDPS 510
+Q P QSQ + +P + I +EP SF + E DN D+P SH +PS
Sbjct: 83 NQSPLNQSQSSANPVTFEIADEPSPSFNHSFFEKDNARDIPQ-QPSHSQNPS 133
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.30
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = +1
Query: 376 AQSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQ-- 549
+ S+G++S S + E S + + D S S S D D S D S+ +
Sbjct: 157 SSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGS 216
Query: 550 IDLAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNS 729
+ +++ S++ + + + SEDS+ +S + ES+ + + SNS
Sbjct: 217 DSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNS 276
>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 29.1 bits (62), Expect = 0.69
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 496 DHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDT 600
+ D + P+D PSDE I DL P D+D++ +T
Sbjct: 285 NEDEKKPPVDTPSDEAINSDLDDP---DSDEAPET 316
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 29.1 bits (62), Expect = 0.69
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 406 SPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAG 564
SP + P E D+ + P + +HD + +G PSD + DL G
Sbjct: 230 SPQPYVRPTSDERPIETDSSVSAPKVA-NHDEELKQGKSTSPSDTVLHPDLNG 281
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 28.3 bits (60), Expect = 1.2
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +1
Query: 403 GSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPL---DVPSD-EPIQI-DLAGP 567
G PN E+ + ++ N+ + + HD + L D+ S+ EP I D G
Sbjct: 16 GPPNTASFKEEEHSGSQTKNYPVVVKCIQEHDPVDTTNVLVADDLDSNFEPFSITDDYG- 74
Query: 568 LRYDND--DSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINE 717
+Y+N + T+LN N + S TSP + S +S R + E
Sbjct: 75 -KYENTLVSHSSTILNEPYNESPSSSSSDSSSRSTSPFSQLSSQSLRLNAEE 125
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 604 LNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSN 726
L + GHLP++S S+ S SF ES +S+ SN
Sbjct: 294 LGPVYENSGHLPSKSHFSSTDSNTDSFGLESDERSLPSVSN 334
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 547 QIDLAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSN 726
Q D L+Y+N S + VL ING + + + +T+P+ S + + +S+++
Sbjct: 41 QEDAVHDLKYENFVSKNHVLQSDINGKKRDSNRDKAAVVTAPIASTHESNYEESVSKFKE 100
Query: 727 S 729
S
Sbjct: 101 S 101
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 424 EPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSD 537
+P +S + + D H DL S + + E L+VPS+
Sbjct: 538 DPNKSLSCSVEDKHYDLHSAVAEENEEVDEELLNVPSN 575
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 574 YDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNS 729
Y +D + +++ G P +D+NLT+P T + + R+ + + S S
Sbjct: 181 YKEFSDDDPIQFPLLSVDGDSPLTEKDTNLTTPATLKASDQQRKVLEKPSVS 232
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 4.9
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Frame = +1
Query: 421 EEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDT 600
++PE + E D ST R+H DV S EP++ + NDD +
Sbjct: 911 QKPEPALKPVEGT--ADPKSTKRNHQETEKTADTDVSSTEPVKRQKTADV---NDDVGEE 965
Query: 601 VLNIIIN---GPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSN 726
+ ++ L ++ + +L SD+++ E++N
Sbjct: 966 EVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTN 1010
>SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase
Alg5 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 26.2 bits (55), Expect = 4.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -3
Query: 135 VIYVH*FMC*YYLVLMFIVYYFLS 64
V+Y+ + C +L+F+VYY+L+
Sbjct: 2 VVYIVLYTCLAGFILLFLVYYYLT 25
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 217 KQYLRKILQTKNCFRLTRNVFSLIHFTDISDCCS 318
K Y + LQ N + R +F + +DIS+ CS
Sbjct: 26 KSYREEFLQQWNHYETAREIFLVNPSSDISEFCS 59
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.8 bits (54), Expect = 6.4
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 388 GTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSD-EPIQIDLAG 564
G + P+I E Q EN++H+DLP + D EG + SD E + ++ A
Sbjct: 4060 GIDDEIQPDIQENNSQP--PPENEDHLDLPEDLKL---DEKEGDVSKDSDLEDMDMEAAD 4114
Query: 565 PLRYDNDDSND 597
+ + D D
Sbjct: 4115 ENKEEADAEKD 4125
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 535 DEPIQIDLAGPLRYDNDDSNDTVLNIIINGPGHLPAQ--SEDSNLTSPLTS 681
D P+ D A L ND+ N +LN + + P P + S+ S L P T+
Sbjct: 342 DAPMDADSA--LEIPNDEDNGEILNKLKDSPFKKPKRRYSKSSTLVLPETN 390
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 25.4 bits (53), Expect = 8.5
Identities = 7/26 (26%), Positives = 18/26 (69%)
Frame = +2
Query: 161 TKSNHNEIKVKTNGHQINVNNTYVKF 238
T ++H + + +NG ++ + +TY+K+
Sbjct: 272 TSASHGVLMLSSNGMEVLLRSTYIKY 297
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,899,408
Number of Sequences: 5004
Number of extensions: 61209
Number of successful extensions: 197
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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