Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5g08
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    26   0.42 
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   2.3  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              23   2.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   3.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.9  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   9.1  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 164 DITFGMGLSDTITLIL-RNLDTITYECSIEIVTKSKE 271
           ++ + MGL  T TLIL R+L  +  + S E+ T+  E
Sbjct: 205 ELAYKMGLESTCTLILGRHLGFLKPDSSSELATRLAE 241


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 203 LILRNLDTITYECSIEIVTKSK-EYTILLSLRFPTNFNTQCELNREAF 343
           ++L N     YE  + ++TK+  +YT  +S + P  + + CE+N E F
Sbjct: 120 IVLYNNADGNYE--VTLMTKATLKYTGDVSWKPPAIYKSSCEINVEYF 165


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
 Frame = +2

Query: 506 ATSARKRSLSNCYPRNES-TCTINNVTYCYTSGVVCD---GIKNCGINDWFDEHLSKCSL 673
           AT+A   SL   Y   +    TI N  +     +      G++ CGI++     + KC +
Sbjct: 3   ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDV 62

Query: 674 PVEKLGYAPVI 706
            + K  YA  +
Sbjct: 63  DIRKDLYANTV 73


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 5   TTDMENAIRNIFSYWSIYLFICN 73
           T D    +R    YW++  F+C+
Sbjct: 33  TPDNNKTVREFNVYWNVPTFMCH 55


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 524 RSLSNCYPRNESTCTI 571
           ++LS C+ RN +TC +
Sbjct: 706 KALSKCHNRNVTTCNM 721


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 318 CVLKFVGNRKDNKMVYSLDFVTISIL 241
           C  +FV    +N  +  LDFV ++++
Sbjct: 340 CDKRFVDESANNLSIEELDFVKLNLI 365


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 318 CVLKFVGNRKDNKMVYSLDFVTISIL 241
           C  +FV    +N  +  LDFV ++++
Sbjct: 355 CDKRFVDESANNLSIEELDFVKLNLI 380


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 139 TLRSNVFRSVQIQHSATINFRYI 71
           T++SN+ +++Q      + FRY+
Sbjct: 49  TIKSNMAKTLQFDVHMMLQFRYL 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,702
Number of Sequences: 438
Number of extensions: 4680
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)