Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5g06
(502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC045582-1|AAH45582.1| 489|Homo sapiens chromosome 3 open readi... 44 3e-04
BC036194-1|AAH36194.3| 491|Homo sapiens chromosome 3 open readi... 44 3e-04
BC013123-1|AAH13123.1| 489|Homo sapiens chromosome 3 open readi... 44 3e-04
AL603910-1|CAO03612.1| 505|Homo sapiens chromosome 6 open readi... 40 0.004
BC113608-1|AAI13609.1| 522|Homo sapiens chromosome 6 open readi... 34 0.24
BC113606-1|AAI13607.1| 522|Homo sapiens chromosome 6 open readi... 34 0.24
BC108714-1|AAI08715.1| 522|Homo sapiens chromosome 6 open readi... 34 0.24
AL603910-2|CAI14878.1| 522|Homo sapiens chromosome 6 open readi... 34 0.24
AK097148-1|BAC04965.1| 522|Homo sapiens protein ( Homo sapiens ... 34 0.24
AL590547-1|CAH73045.1| 430|Homo sapiens chromosome 1 open readi... 31 3.0
BC130573-1|AAI30574.1| 476|Homo sapiens NR1H4 protein protein. 30 5.2
BC071778-1|AAH71778.1| 475|Homo sapiens NR1H4 protein protein. 30 5.2
AF478446-1|AAM53551.1| 486|Homo sapiens farnesoid-X-receptor be... 30 5.2
AF384555-1|AAK60271.1| 476|Homo sapiens farnesol receptor protein. 30 5.2
>BC045582-1|AAH45582.1| 489|Homo sapiens chromosome 3 open reading
frame 59 protein.
Length = 489
Score = 44.0 bits (99), Expect = 3e-04
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Frame = +1
Query: 46 INQYFVVPKPS---NDDYSWRLAFPFQERFYIYNKYNLKSTLK---------IIKLLRDT 189
I+ +++VP S D WRL+F E + K + S+L IIKLL
Sbjct: 266 ISGFYLVPACSYKGKKDNEWRLSFARSE---VQLKKCISSSLMQAYQACKAIIIKLL--- 319
Query: 190 QNLKTLSSYYIKTVFLWESFRTDENFWKSN--ALEFLVLHMLKRLNECLFTGKIANFWCK 363
K +S Y+++++ LW R N+ A FL L ++ L CL N++
Sbjct: 320 SRPKAISPYHLRSMMLWACDRLPANYLAQEDYAAHFL-LGLIDDLQHCLVNKMCPNYFIP 378
Query: 364 EHNLLENIKKETCKTWFNKLSIV 432
+ N+LE++ +ET KLS V
Sbjct: 379 QCNMLEHLSEETVMLHARKLSSV 401
>BC036194-1|AAH36194.3| 491|Homo sapiens chromosome 3 open reading
frame 59 protein.
Length = 491
Score = 44.0 bits (99), Expect = 3e-04
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Frame = +1
Query: 46 INQYFVVPKPS---NDDYSWRLAFPFQERFYIYNKYNLKSTLK---------IIKLLRDT 189
I+ +++VP S D WRL+F E + K + S+L IIKLL
Sbjct: 268 ISGFYLVPACSYKGKKDNEWRLSFARSE---VQLKKCISSSLMQAYQACKAIIIKLL--- 321
Query: 190 QNLKTLSSYYIKTVFLWESFRTDENFWKSN--ALEFLVLHMLKRLNECLFTGKIANFWCK 363
K +S Y+++++ LW R N+ A FL L ++ L CL N++
Sbjct: 322 SRPKAISPYHLRSMMLWACDRLPANYLAQEDYAAHFL-LGLIDDLQHCLVNKMCPNYFIP 380
Query: 364 EHNLLENIKKETCKTWFNKLSIV 432
+ N+LE++ +ET KLS V
Sbjct: 381 QCNMLEHLSEETVMLHARKLSSV 403
>BC013123-1|AAH13123.1| 489|Homo sapiens chromosome 3 open reading
frame 59 protein.
Length = 489
Score = 44.0 bits (99), Expect = 3e-04
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Frame = +1
Query: 46 INQYFVVPKPS---NDDYSWRLAFPFQERFYIYNKYNLKSTLK---------IIKLLRDT 189
I+ +++VP S D WRL+F E + K + S+L IIKLL
Sbjct: 266 ISGFYLVPACSYKGKKDNEWRLSFARSE---VQLKKCISSSLMQAYQACKAIIIKLL--- 319
Query: 190 QNLKTLSSYYIKTVFLWESFRTDENFWKSN--ALEFLVLHMLKRLNECLFTGKIANFWCK 363
K +S Y+++++ LW R N+ A FL L ++ L CL N++
Sbjct: 320 SRPKAISPYHLRSMMLWACDRLPANYLAQEDYAAHFL-LGLIDDLQHCLVNKMCPNYFIP 378
Query: 364 EHNLLENIKKETCKTWFNKLSIV 432
+ N+LE++ +ET KLS V
Sbjct: 379 QCNMLEHLSEETVMLHARKLSSV 401
>AL603910-1|CAO03612.1| 505|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 505
Score = 40.3 bits (90), Expect = 0.004
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Frame = +1
Query: 43 KINQYFVVPKPSND-----DYSWRLAFPFQERFYIYNKYNLKSTL--KIIKLLR--DTQN 195
++ +++VPK + + + +WRL+F E+ + N K+ K K R D ++
Sbjct: 353 RLKPFYLVPKHAKEGNGFQEETWRLSFSHIEKEILNNHGKSKTCCENKEEKCCRFKDKKH 412
Query: 196 LKTLSSYYIKTVFLWESFRT-DENFWKSNALEFLVLHMLKRLNECLFTGKIANFWCKEHN 372
L SSY++KT F + ++ W L + + +CL T K+ N++ E N
Sbjct: 413 LDKFSSYHVKTAFFHVCTQNPQDSQWDRKDLGLCFDNCVTYFLQCLRTEKLENYFIPEFN 472
Query: 373 LL-ENIKKETCKTWFNK 420
L N+ + K + K
Sbjct: 473 LFSSNLIDKRSKEFLTK 489
>BC113608-1|AAI13609.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.24
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Frame = +1
Query: 43 KINQYFVVPKPSND-----DYSWRLAFPFQERFYIYN-------------KYNLKSTLKI 168
++ +++VPK + + + +WRL+F E+ + N K K LK+
Sbjct: 353 RLKPFYLVPKHAKEGNGFQEETWRLSFSHIEKEILNNHGKSKTCCENKEEKCCRKDCLKL 412
Query: 169 IKLL--------RDTQNLKTLSSYYIKTVFLWESFRT-DENFWKSNALEFLVLHMLKRLN 321
+K L +D ++L SSY++KT F + ++ W L + +
Sbjct: 413 MKYLLEQLKERFKDKKHLDKFSSYHVKTAFFHVCTQNPQDSQWDRKDLGLCFDNCVTYFL 472
Query: 322 ECLFTGKIANFWCKEHNLL-ENIKKETCKTWFNK 420
+CL T K+ N++ E NL N+ + K + K
Sbjct: 473 QCLRTEKLENYFIPEFNLFSSNLIDKRSKEFLTK 506
>BC113606-1|AAI13607.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.24
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Frame = +1
Query: 43 KINQYFVVPKPSND-----DYSWRLAFPFQERFYIYN-------------KYNLKSTLKI 168
++ +++VPK + + + +WRL+F E+ + N K K LK+
Sbjct: 353 RLKPFYLVPKHAKEGNGFQEETWRLSFSHIEKEILNNHGKSKTCCENKEEKCCRKDCLKL 412
Query: 169 IKLL--------RDTQNLKTLSSYYIKTVFLWESFRT-DENFWKSNALEFLVLHMLKRLN 321
+K L +D ++L SSY++KT F + ++ W L + +
Sbjct: 413 MKYLLEQLKERFKDKKHLDKFSSYHVKTAFFHVCTQNPQDSQWDRKDLGLCFDNCVTYFL 472
Query: 322 ECLFTGKIANFWCKEHNLL-ENIKKETCKTWFNK 420
+CL T K+ N++ E NL N+ + K + K
Sbjct: 473 QCLRTEKLENYFIPEFNLFSSNLIDKRSKEFLTK 506
>BC108714-1|AAI08715.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.24
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Frame = +1
Query: 43 KINQYFVVPKPSND-----DYSWRLAFPFQERFYIYN-------------KYNLKSTLKI 168
++ +++VPK + + + +WRL+F E+ + N K K LK+
Sbjct: 353 RLKPFYLVPKHAKEGNGFQEETWRLSFSHIEKEILNNHGKSKTCCENKEEKCCRKDCLKL 412
Query: 169 IKLL--------RDTQNLKTLSSYYIKTVFLWESFRT-DENFWKSNALEFLVLHMLKRLN 321
+K L +D ++L SSY++KT F + ++ W L + +
Sbjct: 413 MKYLLEQLKERFKDKKHLDKFSSYHVKTAFFHVCTQNPQDSQWDRKDLGLCFDNCVTYFL 472
Query: 322 ECLFTGKIANFWCKEHNLL-ENIKKETCKTWFNK 420
+CL T K+ N++ E NL N+ + K + K
Sbjct: 473 QCLRTEKLENYFIPEFNLFSSNLIDKRSKEFLTK 506
>AL603910-2|CAI14878.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.24
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Frame = +1
Query: 43 KINQYFVVPKPSND-----DYSWRLAFPFQERFYIYN-------------KYNLKSTLKI 168
++ +++VPK + + + +WRL+F E+ + N K K LK+
Sbjct: 353 RLKPFYLVPKHAKEGNGFQEETWRLSFSHIEKEILNNHGKSKTCCENKEEKCCRKDCLKL 412
Query: 169 IKLL--------RDTQNLKTLSSYYIKTVFLWESFRT-DENFWKSNALEFLVLHMLKRLN 321
+K L +D ++L SSY++KT F + ++ W L + +
Sbjct: 413 MKYLLEQLKERFKDKKHLDKFSSYHVKTAFFHVCTQNPQDSQWDRKDLGLCFDNCVTYFL 472
Query: 322 ECLFTGKIANFWCKEHNLL-ENIKKETCKTWFNK 420
+CL T K+ N++ E NL N+ + K + K
Sbjct: 473 QCLRTEKLENYFIPEFNLFSSNLIDKRSKEFLTK 506
>AK097148-1|BAC04965.1| 522|Homo sapiens protein ( Homo sapiens
cDNA FLJ39829 fis, clone SPLEN2012800. ).
Length = 522
Score = 34.3 bits (75), Expect = 0.24
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Frame = +1
Query: 43 KINQYFVVPKPSND-----DYSWRLAFPFQERFYIYN-------------KYNLKSTLKI 168
++ +++VPK + + + +WRL+F E+ + N K K LK+
Sbjct: 353 RLKPFYLVPKHAKEGNGFQEETWRLSFSHIEKEILNNHGKSKTCCENKEEKCCRKDCLKL 412
Query: 169 IKLL--------RDTQNLKTLSSYYIKTVFLWESFRT-DENFWKSNALEFLVLHMLKRLN 321
+K L +D ++L SSY++KT F + ++ W L + +
Sbjct: 413 MKYLLEQLKERFKDKKHLDKFSSYHVKTAFFHVCTQNPQDSQWDRKDLGLCFDNCVTYFL 472
Query: 322 ECLFTGKIANFWCKEHNLL-ENIKKETCKTWFNK 420
+CL T K+ N++ E NL N+ + K + K
Sbjct: 473 QCLRTEKLENYFIPEFNLFSSNLIDKRSKEFLTK 506
>AL590547-1|CAH73045.1| 430|Homo sapiens chromosome 1 open reading
frame 67 protein.
Length = 430
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +1
Query: 28 KISATKIN-QYFVVPKPSNDDYSWRLAFPFQERFYIYNKY-----NLKSTLKIIKLLRDT 189
K ++KI Q + KP DD + P + +YN Y N+ ++K ++L+
Sbjct: 152 KYGSSKIAIQKITLKKPLEDDGEFVYCLPRKSPKSLYNPYDLQVINIVGSVKEVELIPTL 211
Query: 190 QNLKTLSSYYIKTVF-LWESFRTDENF--WKSN 279
+ L YY+ F ++ FR ++ F WK N
Sbjct: 212 EWLSERRHYYLLRQFKIFSDFRMNKAFVTWKLN 244
>BC130573-1|AAI30574.1| 476|Homo sapiens NR1H4 protein protein.
Length = 476
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 316 LNECLFTGKIANFWCKEHNLLENIKKETCKT 408
L EC++TG + CK L +N+K+ +T
Sbjct: 193 LAECMYTGLLTEIQCKSKRLRKNVKQHADQT 223
>BC071778-1|AAH71778.1| 475|Homo sapiens NR1H4 protein protein.
Length = 475
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 316 LNECLFTGKIANFWCKEHNLLENIKKETCKT 408
L EC++TG + CK L +N+K+ +T
Sbjct: 192 LAECMYTGLLTEIQCKSKRLRKNVKQHADQT 222
>AF478446-1|AAM53551.1| 486|Homo sapiens farnesoid-X-receptor beta
splice variant 2 protein.
Length = 486
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 316 LNECLFTGKIANFWCKEHNLLENIKKETCKT 408
L EC++TG + CK L +N+K+ +T
Sbjct: 203 LAECMYTGLLTEIQCKSKRLRKNVKQHADQT 233
>AF384555-1|AAK60271.1| 476|Homo sapiens farnesol receptor protein.
Length = 476
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 316 LNECLFTGKIANFWCKEHNLLENIKKETCKT 408
L EC++TG + CK L +N+K+ +T
Sbjct: 193 LAECMYTGLLTEIQCKSKRLRKNVKQHADQT 223
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,814,762
Number of Sequences: 237096
Number of extensions: 1299355
Number of successful extensions: 6466
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6466
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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