Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5g06
(502 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 27 0.15
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.59
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.59
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 1.8
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 1.8
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 1.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 2.4
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 2.4
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 23 2.4
AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein. 22 3.1
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 4.1
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 21 5.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 7.2
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 7.2
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 21 9.5
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 9.5
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 26.6 bits (56), Expect = 0.15
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 64 VPKPSNDDYSWRLAFPFQERFYIYNKYN--LKSTLKIIKLLRDTQNLKTL 207
VPK + + Y L P+ F IY+K L++TL+++ + + + TL
Sbjct: 129 VPKMATELYEESLFVPYITNFIIYSKRMDVLEATLRVLCMTDGKEGMHTL 178
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 24.6 bits (51), Expect = 0.59
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 340 KIANFWCKEHNLLENIKKETCKTWFNKLSI 429
+I NF EHN + + WFN L I
Sbjct: 401 EILNFRKSEHNGTNGYQYQVVGKWFNSLDI 430
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 24.6 bits (51), Expect = 0.59
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 340 KIANFWCKEHNLLENIKKETCKTWFNKLSI 429
+I NF EHN + + WFN L I
Sbjct: 491 EILNFRKSEHNGTNGYQYQVVGKWFNSLDI 520
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 358 CKEHNLLENIKKETCKTWFNKLSIVINNIDRNKFVNPEIVYIYF 489
C+ H ++ KK C++W +K ID + IV+ +F
Sbjct: 389 CELH--MQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFF 430
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 358 CKEHNLLENIKKETCKTWFNKLSIVINNIDRNKFVNPEIVYIYF 489
C+ H ++ KK C++W +K ID + IV+ +F
Sbjct: 389 CELH--MQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFF 430
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 220 YNNLIKFLNFE--YHVRVL*FSVLISNYIYYIY 128
+NN+IK++NF+ + + + +VL +Y +Y Y
Sbjct: 3 FNNVIKYINFDRFFFIEGM-TNVLDFDYYFYDY 34
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 7 NSKIDLDKISATK-INQYFVVPKPSNDDYSWRLAFPFQERFYIYN 138
N + DL SA + + Y P+P D ++ + + FY++N
Sbjct: 176 NGEFDLVNFSARRNVEYYSCCPEP-YPDITYEIRLRRRPMFYVFN 219
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = -1
Query: 166 FSVLISNYIYYIYKIFLEMETPIASCSHHW 77
+ V+++ I+Y + + + E P SC+++W
Sbjct: 77 YIVILAWAIFYFF-MSMRSELPWGSCNNYW 105
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 382 FQANYVLYTKSWLFCL*TNIRSISLTCVKLGI 287
F+ +Y+L K FC+ T +T +K GI
Sbjct: 30 FELDYMLGRKITFFCMATGFPRPEITWLKDGI 61
>AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein.
Length = 80
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -2
Query: 465 VYEFISVYVIDYNR*FIKPCLTCFLFYVFKQIMFFTPKVGYFA 337
V + + YV + +PC C Y +K IM + +FA
Sbjct: 1 VEKVVMPYVSTMPKSLKEPCDGCAAPYGYKNIMTLSQDTSHFA 43
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 4.1
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +1
Query: 4 NNSKIDLDKISATKI-NQYFVVPKPSNDDY 90
NNSK D I ATK+ Y P ND Y
Sbjct: 213 NNSKWDFKVIKATKVLKMYACCP---NDTY 239
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.4 bits (43), Expect = 5.5
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1
Query: 379 ENIKKETCKTWFNK 420
E +K+ C+ WF+K
Sbjct: 36 EALKERQCQNWFDK 49
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 7.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 153 INTENYKTLT*YSKFKNFIKLLYKNCI 233
I++ + KT+ + +KN+ K LY N I
Sbjct: 315 ISSLSNKTIHNNNNYKNYNKKLYYNII 341
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 88 YSWRLAFPFQERFYIYNK 141
+ W L +PF+ I NK
Sbjct: 210 WHWHLVYPFEGDIRIVNK 227
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 114 KWKRQSPAVVII 79
KWK+Q+P + +I
Sbjct: 62 KWKKQNPGLDVI 73
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 313 SLTCVKLGIPKRSTSKNSHL 254
+LT VKL PK+ +K S +
Sbjct: 214 NLTMVKLNWPKKRVTKMSSI 233
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,586
Number of Sequences: 438
Number of extensions: 2902
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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