Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5g04
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48717-4|CAA88607.1|  515|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AF067942-1|AAG45570.1|  488|Caenorhabditis elegans Hypothetical ...    29   3.6  
AL132853-8|CAB60436.2|  511|Caenorhabditis elegans Hypothetical ...    29   4.8  
U40948-3|AAA81729.1|  307|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z48717-4|CAA88607.1|  515|Caenorhabditis elegans Hypothetical
           protein T10B9.7 protein.
          Length = 515

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 268 AYTTWLGSSNPSCGEAIQ*SIKSVCGDSDADVDKLQHPRLVYTEAVVKE 414
           +Y T+L + NP   E +   I    G S+ + +KL   RL Y + V+KE
Sbjct: 333 SYVTYLLAVNPKIQEKVIEEIAREFGTSEVEFEKL--GRLKYMDCVIKE 379


>AF067942-1|AAG45570.1|  488|Caenorhabditis elegans Hypothetical
           protein ZK6.8 protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 542 PLLGESSRYATNILARSMIAVLRKCCVCNISSLV 643
           PLL + +RY   I+A  +I  +  CC+C++ S+V
Sbjct: 365 PLLFQPTRYLVFIIA--LIGGMSDCCLCSVRSVV 396


>AL132853-8|CAB60436.2|  511|Caenorhabditis elegans Hypothetical
           protein Y80D3A.5 protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = +1

Query: 262 TPAYTTW---LGSSNPSCGEAIQ*SIKSVCGDSDADVDKLQHPRLVYTEAVVKET 417
           T A   W   L  +NP     +Q  I  V G++D  V      +L Y EA  KET
Sbjct: 318 TSAAMNWFLHLMGANPEIQSKVQKEIDEVLGEADRPVSYEDLGKLKYLEACFKET 372


>U40948-3|AAA81729.1|  307|Caenorhabditis elegans Hypothetical
           protein F55D10.4 protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -3

Query: 292 WIRARLCMQVCFFVIR*SSTFWIAKPEHLASGSV 191
           W+   L +   FF+IR S +F +A P HLA  SV
Sbjct: 141 WLLVTLLLLSDFFLIRLSRSFVLAVPFHLALLSV 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,776,631
Number of Sequences: 27780
Number of extensions: 350800
Number of successful extensions: 741
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)