Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5g02
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.7  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   4.7  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.1  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.1  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 216 RWVVVFKRSLYQYN 257
           RWV+V  R +Y YN
Sbjct: 564 RWVIVALRQMYDYN 577


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 562 FGVQKTLDFHVVQFDSN 512
           FGVQK+ D H+++   N
Sbjct: 98  FGVQKSADSHIIRLKQN 114


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -2

Query: 669 FLRYFISIRGVSTVNFSVSIASTSLSVLLLM*NSTILAFRRPWTFTSFNSTVILELAMYN 490
           F+ Y+ ++RG+ T    + +++             +LA    W   S  S ++L+   YN
Sbjct: 7   FVIYYQNVRGLRTKYNELRLSANESGF-------EMLALTETWLNESIPSNMVLDSDSYN 59

Query: 489 EYFC 478
            Y C
Sbjct: 60  IYRC 63


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 470 LYLQKYSLYIANSNITVELNDVKVQGLLNAKIVEFYINKRT 592
           +YLQ  SL +    I  +L  + V  L N ++   +IN  T
Sbjct: 287 IYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPAT 327


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,827
Number of Sequences: 2352
Number of extensions: 17085
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)