Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5g02
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023828-15|CAA19460.1|  411|Caenorhabditis elegans Hypothetical...    30   1.6  
U80454-4|AAB37876.3|  896|Caenorhabditis elegans Prion-like-(q/n...    29   3.8  
Z92782-5|CAB07190.1|  385|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U29535-11|AAK31456.1|  947|Caenorhabditis elegans Hypothetical p...    28   8.8  
AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical...    28   8.8  
AC006697-1|AAF60390.2|  278|Caenorhabditis elegans Hypothetical ...    28   8.8  

>AL023828-15|CAA19460.1|  411|Caenorhabditis elegans Hypothetical
           protein Y17G7B.13 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 345 NIRVLTMIQYEDLAPVST*IV-SGHTSSITRRVYPTTNLYQIHYICRSTHCTSPIL 509
           N + LT +Q  D   +   ++ SGH+S+IT  + P    +Q H      HC + IL
Sbjct: 141 NPKRLTSLQMLDATQLPMTVMDSGHSSTITVEIKPKQGFFQRHPNVDVPHCNNCIL 196


>U80454-4|AAB37876.3|  896|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 66
           protein.
          Length = 896

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +2

Query: 602 VLAIETEKLTVETPRMLMKYLRKAQEPIELVDNLYVGYGVVTITATMPYINNIQLTNAEV 781
           +L+ ET K+T+E      + +RK  E  E   N++  +G+         I NI L +  +
Sbjct: 18  LLSSETTKITIEADAKNRETIRKLLEAYEQEHNVFKAHGIKGADRIFNEIENILLLDLNI 77


>Z92782-5|CAB07190.1|  385|Caenorhabditis elegans Hypothetical
           protein F14F8.6 protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = +2

Query: 461 PDPLYLQKYSLYIANSNITVELN----DVKVQGLLNAKIVEFYINKRTDKLVLAIETEKL 628
           P P YL+ Y +Y+ +S  TV +N          +  A  + + +NKR   L+ + E+   
Sbjct: 114 PPPSYLEMYIIYVFHSLETVSMNLSVWFAVFMTIFRALAIRYPLNKRIKSLITS-ESGLC 172

Query: 629 TVETPRMLM 655
           TV T  +L+
Sbjct: 173 TVITITILI 181


>Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical
           protein T13H5.3 protein.
          Length = 626

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
 Frame = +2

Query: 308 LVSFFGCAKSSSEHPGSDYDSIRRPCPSFNIDCIRSYFQYHASCVPHYEPIPDPLYLQKY 487
           L+SF G A      PG D   + + C   N+     YF   AS    Y   P PL     
Sbjct: 184 LISFAGAAGHWVLKPGYDLQQLMKYCDFVNV-MSYDYFGAWASKWGAYTGPPAPLQFAMP 242

Query: 488 SLYIANSNITVELNDVKVQGLLNAKI---VEFY 577
             +    N+   + D   Q     KI   V FY
Sbjct: 243 KKFSGRMNVHATMKDYSCQIKATDKINMGVPFY 275


>U29535-11|AAK31456.1|  947|Caenorhabditis elegans Hypothetical
           protein C25H3.11 protein.
          Length = 947

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/73 (26%), Positives = 38/73 (52%)
 Frame = +2

Query: 539 VQGLLNAKIVEFYINKRTDKLVLAIETEKLTVETPRMLMKYLRKAQEPIELVDNLYVGYG 718
           V  +LN  I E+  +  TD+L +A+ + ++ +E   +    LRK   P+E+   L    G
Sbjct: 6   VAWVLNNYIGEYLEDLNTDQLSVALLSGQVELENVPLKKTALRKLDLPVEVKSGL---LG 62

Query: 719 VVTITATMPYINN 757
            +T++  + +I +
Sbjct: 63  KLTLSVPITHIRS 75


>AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical
           protein F07B7.14 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 401 DCIRSYFQYHASCVPHYEPIPDPL 472
           +C    +  +++CV  +EP+PDP+
Sbjct: 268 ECNHKLYVQNSTCVQEWEPLPDPV 291


>AC006697-1|AAF60390.2|  278|Caenorhabditis elegans Hypothetical
           protein W09B7.3 protein.
          Length = 278

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 401 DCIRSYFQYHASCVPHYEPIPDPL 472
           +C    +  +++CV  +EP+PDP+
Sbjct: 145 ECNHKLYVQNSTCVQEWEPLPDPV 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,272,346
Number of Sequences: 27780
Number of extensions: 359992
Number of successful extensions: 907
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)