Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f15
         (680 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0593 + 4417753-4417759,4418240-4419698,4419819-4421301,442...    29   2.6  
01_01_1024 + 8083372-8083758,8083970-8084149,8084261-8084590,808...    29   4.5  
10_08_0373 - 17286104-17288839                                         28   7.9  
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141...    28   7.9  
03_02_0600 - 9748382-9748933,9749805-9749840,9751164-9751218,975...    28   7.9  

>07_01_0593 +
           4417753-4417759,4418240-4419698,4419819-4421301,
           4421378-4421419,4421420-4421584,4421669-4421864,
           4421955-4422066,4422154-4422301,4422417-4422614,
           4422710-4422866,4422882-4422988,4423084-4423245,
           4423314-4423562,4423676-4423810
          Length = 1539

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
 Frame = +1

Query: 220 QQFFERNSECSDQNDQDVEVKLTNQQTLIL--STLVPDEILLMEKFDTNDLKRFVGVVLM 393
           Q+  E   +  D    DV V++ N   L    S L+P E++ M+    ND+  F    + 
Sbjct: 373 QEMDEYIFDSEDSFYSDVPVRILNNWALYNADSRLIPLELIPMKAGAENDIVVFGSGFMR 432

Query: 394 ADVSGYTALSERYNNTGKGGTYRLTVTLNTYLGSLIELIYAYGGDVL 534
            D     + +E    +    +      ++ YL  + E +  +GG ++
Sbjct: 433 EDDGSCCSTAESAKLSSSSSSNHQDAGVSIYLSPIKEWVIEFGGSMI 479


>01_01_1024 +
           8083372-8083758,8083970-8084149,8084261-8084590,
           8084679-8084792,8084942-8085682
          Length = 583

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 49  DMNFRKTRAQSR-RNSMNIILDTGKWQNYGKRISQ 150
           D N RK R   R R+   II D  +W+ YG+++++
Sbjct: 281 DANMRKARVSVRARSEAPIIADGCQWRKYGQKMAK 315


>10_08_0373 - 17286104-17288839
          Length = 911

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 304 LTSADSLA*LQRLDRFGRNIHCFSQRT 224
           +TS  SL    RLDR G+ +HC++ R+
Sbjct: 443 ITSVLSLLTDLRLDRLGKEVHCYAFRS 469


>05_01_0195 -
           1409820-1409966,1410304-1410360,1410774-1410828,
           1410902-1411002,1411051-1411205,1411395-1411459,
           1411545-1411595,1411817-1411893,1412153-1412262,
           1412355-1412403,1412528-1412572,1412689-1412813,
           1413087-1413228,1413336-1413446
          Length = 429

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 322 GQA*KVLTSADSLA*LQRLDRFGRNIHCFSQRTVAPN 212
           G A ++ +SA SL      ++F  ++H F+Q T+AP+
Sbjct: 17  GLARRLYSSASSLLFDDTQEQFKESVHKFAQETIAPH 53


>03_02_0600 -
           9748382-9748933,9749805-9749840,9751164-9751218,
           9751588-9751697,9751955-9752602
          Length = 466

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 136 FHSFAISLCPRLCS 95
           FHSF++S CPR C+
Sbjct: 408 FHSFSVSYCPRNCN 421


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,414,955
Number of Sequences: 37544
Number of extensions: 291691
Number of successful extensions: 723
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)