Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f15
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AF039712-2|AAK21401.1|  401|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z75543-4|CAA99871.1|  383|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z83221-9|CAB05710.1|  400|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z82095-8|CAB05029.1|  400|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical
           protein ZK849.4 protein.
          Length = 602

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +1

Query: 271 VEVKLTNQQTLILSTLVPDEILLMEKFDTNDLKRFVGVVLMAD 399
           V+VKLT ++T+I   LV  +ILL  +  T   KRFV +  + D
Sbjct: 204 VDVKLTARRTII-RYLVLSQILLFREISTKVKKRFVDLKCLVD 245


>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/98 (18%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
 Frame = +1

Query: 190 PKYNEIKDWVQQFFERNSECSDQNDQDVEVKLTNQQTLIL----STLVPDEILLMEKFDT 357
           P   +I + V++  +R ++C    D+ VE++   +   +     S L P  +  +++   
Sbjct: 342 PVTRDIDELVRETADRLADCDVGQDRAVEIRNAEKDVRLTSWTNSGLHPTILETLKRIKY 401

Query: 358 NDLKRFVGVVLMADVSGYTALSERYNNTGKGGTYRLTV 471
           N+++   G ++   + G+  L +   + GK   + L +
Sbjct: 402 NNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPI 439


>AF039712-2|AAK21401.1|  401|Caenorhabditis elegans Hypothetical
           protein F54D7.3 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = -1

Query: 128 FCHFPVSKIMFMEFLR--DW-ARVLRKFI 51
           FC  P S +MF+ FLR  DW  + +RKFI
Sbjct: 264 FCWTPYSILMFLHFLRHTDWIPKDIRKFI 292


>Z75543-4|CAA99871.1|  383|Caenorhabditis elegans Hypothetical
           protein K01D12.4 protein.
          Length = 383

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 140 EYLKGISKQKRKNLTTNPSTTR*RIGCNSSLR 235
           ++ +GI +++     T PS TR ++GC + LR
Sbjct: 5   QFARGIGQREMLRANTLPSITRAKVGCFARLR 36


>Z83221-9|CAB05710.1|  400|Caenorhabditis elegans Hypothetical
           protein C49A1.2 protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 271 VEVKLTNQQTLILSTLVPDEILLMEKFDTNDLKRFVGVVLMAD 399
           ++ KLT ++T+I   LV  +ILL  +F     KRFV +  + D
Sbjct: 129 MDTKLTARRTII-RYLVLSQILLFREFSVKVKKRFVDLRSLVD 170


>Z82095-8|CAB05029.1|  400|Caenorhabditis elegans Hypothetical
           protein C49A1.2 protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 271 VEVKLTNQQTLILSTLVPDEILLMEKFDTNDLKRFVGVVLMAD 399
           ++ KLT ++T+I   LV  +ILL  +F     KRFV +  + D
Sbjct: 129 MDTKLTARRTII-RYLVLSQILLFREFSVKVKKRFVDLRSLVD 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,803,835
Number of Sequences: 27780
Number of extensions: 272773
Number of successful extensions: 798
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)