Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f15
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       29   0.054
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    26   0.29 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.67 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.2  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   8.2  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 28.7 bits (61), Expect = 0.054
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 262 DQDVEVKLTNQQTLILSTLVPDEIL-LMEKFDTNDLKRFVGVV 387
           D +  V L  +QTL+ S   PDE+  L  +F  N L   VG+V
Sbjct: 373 DHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIV 415


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 262 DQDVEVKLTNQQTLILSTLVPDEILLMEKFDTNDLKRFV 378
           D DVE  +  ++ L LST  P  + L   F T D   FV
Sbjct: 25  DDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFV 63


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
 Frame = +1

Query: 271 VEVKLTNQQTLILSTLVPDEILLMEK-----FDTNDLKRFVG-----VVLMADVSGYTAL 420
           +E + T Q+ L+LS L     + M +      DT   K ++       +L AD+ G+TA+
Sbjct: 226 IEEQSTEQERLLLSVLPEHVAVKMRQDLGASLDTQFKKIYMSRHENVSILYADIVGFTAI 285

Query: 421 SERYN 435
           S  Y+
Sbjct: 286 SSTYS 290


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 433 CSVPKGRYTLIRQPLGQRRRNALNRL 356
           C++   RY  + QPL   RR    RL
Sbjct: 130 CAISIDRYLAVTQPLIYSRRRRSKRL 155


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 451 LLYQYCCSVPKGRYTLIRQPLGQRRRNALNRLYQTFP 341
           L  ++   +P   Y L  QPL ++    L  L +T+P
Sbjct: 142 LANEFLSILPIFLYALGEQPLTEQNLEELRDLKETYP 178


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 451 LLYQYCCSVPKGRYTLIRQPLGQRRRNALNRLYQTFP 341
           L  ++   +P   Y L  QPL ++    L  L +T+P
Sbjct: 180 LANEFLSILPIFLYALGEQPLTEQNLEELRDLKETYP 216


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -2

Query: 178 ILPLLLRNPFEIFVFHSFAISLCPRLCSWSFFG 80
           +LPL+ +     F+ ++ +I +   + +W+F G
Sbjct: 292 VLPLIAKYLLFTFIMNTVSILVTVIIINWNFRG 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,343
Number of Sequences: 438
Number of extensions: 3642
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)