Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f14
         (419 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0504 + 16616026-16616137,16616613-16616768,16616884-166170...    31   0.50 
11_08_0001 + 27467447-27467707,27467831-27468433                       28   2.7  
04_03_0508 + 16643416-16643530,16643939-16644094,16644244-166444...    28   2.7  
09_02_0207 - 5793848-5794276,5794523-5794645,5794742-5795250,579...    27   4.6  
11_03_0107 + 10084234-10084348,10084830-10084834,10085351-100858...    27   8.1  

>04_03_0504 +
           16616026-16616137,16616613-16616768,16616884-16617045,
           16618152-16618480
          Length = 252

 Score = 30.7 bits (66), Expect = 0.50
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 209 LGRYWQHIPTLVLELEKIKE-NDNENNSGIKITVLHSIDSD 328
           +G  WQH+   VL++EKI+E   +ENN   ++    +  +D
Sbjct: 121 VGNLWQHVDLKVLKMEKIRELLQDENNEEEEVNSFEAKKAD 161


>11_08_0001 + 27467447-27467707,27467831-27468433
          Length = 287

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 128 DQDLTDVED-EENSTAYKDSFTEKRYRCLGRYWQHIPTLVLELEKIKE 268
           DQ+L   E  E +S A  D F     RCL R  +  PT+   +E++K+
Sbjct: 222 DQELLSTEALETHSIARIDRFAAIAVRCLKRIVEKRPTMAEVVEELKQ 269


>04_03_0508 +
           16643416-16643530,16643939-16644094,16644244-16644405,
           16644964-16645121,16645241-16645294,16645950-16646105,
           16646241-16646582
          Length = 380

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 221 WQHIPTLVLELEKIKENDNENNSGIKITVLHSIDSDYENR 340
           WQH+   VL++EKIK  D     G K T  + ++S  EN+
Sbjct: 126 WQHLDIKVLKMEKIK--DMLQGVGDKSTCANEMNSFPENQ 163


>09_02_0207 -
           5793848-5794276,5794523-5794645,5794742-5795250,
           5795543-5795648,5795798-5795959,5796094-5796144,
           5796229-5796394,5796624-5797093
          Length = 671

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 251 LEKIKENDNENNSGIKITVLHSIDSDYEN 337
           LEK KE  +EN + +  T  +S  +D++N
Sbjct: 434 LEKTKETKSENKTNVHATNFNSFVADFDN 462


>11_03_0107 +
           10084234-10084348,10084830-10084834,10085351-10085803,
           10086143-10086267,10087282-10087345,10087452-10087508,
           10088475-10088485,10089923-10090802
          Length = 569

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 17  FFFVGLSLLNSFVNYSRFICKQLNIGI 97
           FF +G+  + SFV    F C ++++G+
Sbjct: 439 FFLIGIFDVTSFVGLLEFFCSEVSMGM 465


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,595,619
Number of Sequences: 37544
Number of extensions: 174888
Number of successful extensions: 368
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)