BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5f14
(419 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ304410-1|CAC67443.1| 190|Anopheles gambiae calpain protein. 25 1.5
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 24 2.6
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 23 6.0
AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprote... 22 7.9
>AJ304410-1|CAC67443.1| 190|Anopheles gambiae calpain protein.
Length = 190
Score = 24.6 bits (51), Expect = 1.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 209 LGRYWQHIPTLVLELEKIKENDNENNSGIKITVL 310
L +W H P V+ L+ E+D E N + I +L
Sbjct: 108 LDTFW-HNPQYVIRLDDPDEDDEEGNCTVIIALL 140
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 23.8 bits (49), Expect = 2.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 221 WQHIPTLVLELEKIKENDNE 280
W+H T+V+ L K+KE E
Sbjct: 1052 WEHNSTIVVMLTKLKEMGRE 1071
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 22.6 bits (46), Expect = 6.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 129 TRI*QMWKMKKIPLRTRTLLQKNGTV 206
T I ++ + + LRT TL+Q++GT+
Sbjct: 220 TMITILYALIGLKLRTSTLMQRDGTL 245
>AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprotein
protein.
Length = 470
Score = 22.2 bits (45), Expect = 7.9
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +2
Query: 11 YVFFFVGLSLLNSFVNYSRFICKQLNIGIICINMQTRWVDQDLTDVED 154
+V F G + L +F+ F LN+ + + +Q + + ++ED
Sbjct: 66 HVMIFAGFAFLMTFLKRYGFSASGLNLLVAALVVQWAIIMRGCYEMED 113
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,052
Number of Sequences: 2352
Number of extensions: 8209
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -