Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f14
         (419 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   5.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.5  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    20   9.9  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 119 RWVDQDLTDVEDEENSTAYKDSFTEKRYRC 208
           R +++ L +VE EEN    +D +    Y C
Sbjct: 103 RSLEKLLCNVEAEENYNLLEDIYETLSYDC 132


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 111 MFIQIIPIFSCLQINRL*FTNEFNNDKPTK 22
           M++++    +C+   R  +    N+DK TK
Sbjct: 485 MYLRLKARRACMNYERFTYKININSDKETK 514


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 111 MFIQIIPIFSCLQINRL*FTNEFNNDKPTK 22
           M++++    +C+   R  +    N+DK TK
Sbjct: 485 MYLRLKARRACMNYERFTYKININSDKETK 514


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 230 IPTLVLELEKIKENDNENNSGIKITVLHSIDSDYEN 337
           +PT     +  K  +  N +   I  +HSID D EN
Sbjct: 86  VPTTQEINKPFKRLELFNITTTTIHSIHSIDGDEEN 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,939
Number of Sequences: 438
Number of extensions: 2596
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)