Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f13
         (474 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical pr...    30   0.98 
Z81585-1|CAB04681.2|  343|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z68879-6|CAA93086.1|  207|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF010239-1|AAB65417.1|  207|Caenorhabditis elegans glutathione S...    27   9.1  

>U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical
           protein C14A11.6 protein.
          Length = 597

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 173 RHDDFFLQARALATCSNRQSKIHKRLFFFMIKRKFLANYDFIVPVKLTTF*WV 15
           R+D   L  R L   SN QS++     FF I +K    + + +P+    F W+
Sbjct: 65  RNDTMELMTRKLIRVSNNQSQLVSFWIFFFISQKHFLRHTYKMPICSFQF-WI 116


>Z81585-1|CAB04681.2|  343|Caenorhabditis elegans Hypothetical
           protein T05E12.1 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 161 FFLQARALATCSNRQSKIHKRLFFFMIKRKFLANYDFIVPV 39
           FF   +   T S +  ++H++LFF +  +  L      +PV
Sbjct: 224 FFYMKKFSFTMSQKTKELHRQLFFTLTLQTLLPGITMFIPV 264


>Z68879-6|CAA93086.1|  207|Caenorhabditis elegans Hypothetical
           protein K08F4.7 protein.
          Length = 207

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 298 VFFLQQLTSIVLNNSHANHHHRLRVE 221
           +FF +Q TS V   S A+H +++R E
Sbjct: 99  IFFFRQFTSSVFYGSDADHINKVRFE 124


>AF010239-1|AAB65417.1|  207|Caenorhabditis elegans glutathione
           S-transferase protein.
          Length = 207

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 298 VFFLQQLTSIVLNNSHANHHHRLRVE 221
           +FF +Q TS V   S A+H +++R E
Sbjct: 99  IFFFRQFTSSVFYGSDADHINKVRFE 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,880,949
Number of Sequences: 27780
Number of extensions: 143955
Number of successful extensions: 323
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)