Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f09
         (262 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     26   0.058
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    26   0.058
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           26   0.058
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    26   0.058
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   1.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   3.8  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    20   3.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   3.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   3.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    19   8.8  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 0.058
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 31  YDYNNYYLPTLHDDH 75
           Y Y NYY P LH  H
Sbjct: 79  YGYGNYYHPQLHSHH 93


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 26.2 bits (55), Expect = 0.058
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 31  YDYNNYYLPTLHDDH 75
           Y Y NYY P LH  H
Sbjct: 79  YGYGNYYHPQLHSHH 93


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 26.2 bits (55), Expect = 0.058
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 31  YDYNNYYLPTLHDDH 75
           Y Y NYY P LH  H
Sbjct: 79  YGYGNYYHPQLHSHH 93


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 26.2 bits (55), Expect = 0.058
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 31  YDYNNYYLPTLHDDH 75
           Y Y NYY P LH  H
Sbjct: 79  YGYGNYYHPQLHSHH 93


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 167 SIVN*EW-LHRFLFFTFVNVRTNIPRII 247
           SI+N  + L +F+ FT   + TN+ RII
Sbjct: 167 SIINFGYTLAKFMIFTSTCIYTNLLRII 194


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 61  LHDDHDHSVKSDTTEKKK 114
           + D+ DH  K + + KKK
Sbjct: 221 IEDEPDHKWKKNDSSKKK 238


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 157 FCKFNCQLRMAPSIFVLYVRKCQNK 231
           F  F C LR A     L  R  +NK
Sbjct: 60  FMDFRCYLRPASGFQSLQFRLLENK 84


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 157 FCKFNCQLRMAPSIFVLYVRKCQNK 231
           F  F C LR A     L  R  +NK
Sbjct: 120 FMDFRCYLRPASGFQSLQFRLLENK 144


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 157 FCKFNCQLRMAPSIFVLYVRKCQNK 231
           F  F C LR A     L  R  +NK
Sbjct: 120 FMDFRCYLRPASGFQSLQFRLLENK 144


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 124 RNRMVT*TLGIFCKFNCQLRMAPSIFVLYVRKCQNKYS 237
           +N +V   L +F  F  Q   +P   ++YV  C N ++
Sbjct: 131 KNGIVFAGLIVFILFFAQGLTSPIFNLVYVYCCDNNFN 168


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +1

Query: 13  EVNREHYDYNNYYLPTLHDDHDHSVKSDTTEKKK 114
           E   E  D +   +  + +D D   K +  +KKK
Sbjct: 234 EEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKK 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,949
Number of Sequences: 336
Number of extensions: 735
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4164927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)