Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5f09
(262 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical pr... 27 1.4
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 27 1.4
Z68760-4|CAE17822.1| 160|Caenorhabditis elegans Hypothetical pr... 27 1.8
U41624-1|AAF99942.2| 201|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 25 5.6
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 25 7.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 25 7.4
AF098986-2|AAC67423.1| 410|Caenorhabditis elegans Hypothetical ... 25 7.4
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 25 9.8
>U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical
protein C03G6.12 protein.
Length = 430
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 148 LGIFCKFNCQLRMAPSIFVLYVRKCQNKYS*NYLKIL 258
+GIF Q RM + ++YV NK+S +K L
Sbjct: 388 IGIFNLLETQQRMFKDLHIMYVVPLMNKFSRELIKFL 424
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 123 QEQDGNLDSRYIL*IQLSIENGSIDFCSLRS*MSEQI 233
+E DGNLD + ++ +Q++ S C++R +E +
Sbjct: 519 EENDGNLDEKSLIGVQITPSRTSPGHCTVRRVKAEAV 555
>Z68760-4|CAE17822.1| 160|Caenorhabditis elegans Hypothetical
protein F36H1.9 protein.
Length = 160
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 246 IILGIFVLTFTNVKNKNRWSHSQLTIEFTKYT 151
II G+ + FTN+ +N W TKYT
Sbjct: 104 IIAGVTEIEFTNLYGENLWFTGLWATAITKYT 135
>U41624-1|AAF99942.2| 201|Caenorhabditis elegans Hypothetical
protein F46C8.3 protein.
Length = 201
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 31 YDYNNYYLPTLHDDHDHSVKSDTTEKKKXFCRN 129
Y Y++ Y P D H+ EKK+ CRN
Sbjct: 101 YYYSSQYAPEPWDRPKHTYSPSIEEKKQLECRN 133
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +1
Query: 16 VNREHYDYNNYYLPTLHDDHDHSVKSDTTEKKK 114
+ ++H DY N Y+P + + S K+D ++ +
Sbjct: 1423 IPKDHEDYGNDYVPFGTESSEESQKADGNQENQ 1455
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +1
Query: 16 VNREHYDYNNYYLPTLHDDHDHSVKSDTTEKKK 114
+ ++H DY N Y+P + + S K+D ++ +
Sbjct: 1423 IPKDHEDYGNDYVPFGTESSEESQKADGNQENQ 1455
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +1
Query: 16 VNREHYDYNNYYLPTLHDDHDHSVKSDTTEKKK 114
+ ++H DY N Y+P + + S K+D ++ +
Sbjct: 1423 IPKDHEDYGNDYVPFGTESSEESQKADGNQENQ 1455
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +1
Query: 7 TVEVNREHYDYNNYYLP----TLHDD 72
T V REH+D Y+P T HDD
Sbjct: 5011 TTTVTREHFDTEEDYIPSESRTSHDD 5036
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +1
Query: 7 TVEVNREHYDYNNYYLP----TLHDD 72
T V REH+D Y+P T HDD
Sbjct: 5011 TTTVTREHFDTEEDYIPSESRTSHDD 5036
>AF098986-2|AAC67423.1| 410|Caenorhabditis elegans Hypothetical
protein C36C9.3 protein.
Length = 410
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +1
Query: 16 VNREHYDYNNYYLPTLHD--DHDHSVKSDTT 102
+ +E +DY Y+ ++D DHD S+ S +T
Sbjct: 42 IPQEEFDYWYYHFSNVNDNLDHDKSLDSKST 72
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 256 KFLNNSRNICSDIYERKEQKSMEPFS 179
KF+ + +C RKE K++ PFS
Sbjct: 379 KFIGDFGKLCVPYVFRKEAKNINPFS 404
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,927,890
Number of Sequences: 27780
Number of extensions: 71097
Number of successful extensions: 240
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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