Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5f06
(477 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q58425 Cluster: Carbamoyl-phosphate synthase small chai... 41 0.012
UniRef50_Q181J3 Cluster: Carbamoyl-phosphate synthase,pyrimidine... 39 0.050
UniRef50_Q1IPK5 Cluster: Carbamoyl-phosphate synthase, small sub... 35 1.1
UniRef50_Q0CVP6 Cluster: Cholinesterase; n=5; Trichocomaceae|Rep... 34 1.4
UniRef50_Q10656 Cluster: Myoblast growth factor receptor egl-15 ... 34 1.9
UniRef50_Q54VU8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_Q0R5A7 Cluster: Putative uncharacterized protein; n=2; ... 32 5.7
UniRef50_UPI00015BC8BF Cluster: UPI00015BC8BF related cluster; n... 32 7.5
UniRef50_Q5C0M6 Cluster: SJCHGC07531 protein; n=1; Schistosoma j... 32 7.5
UniRef50_A6LJE1 Cluster: Binding-protein-dependent transport sys... 31 10.0
UniRef50_Q81WF1 Cluster: Carbamoyl-phosphate synthase small chai... 31 10.0
>UniRef50_Q58425 Cluster: Carbamoyl-phosphate synthase small chain;
n=11; cellular organisms|Rep: Carbamoyl-phosphate
synthase small chain - Methanococcus jannaschii
Length = 354
Score = 41.1 bits (92), Expect = 0.012
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3
Query: 36 KTYY*TINFKNGSGRSKNISSNKI*IAKSRHSQNVQ---LPKNVSCGFTKLYDQTAEGTR 206
+TY + G+ K++ + K+ I H V+ LP +V F L D T EG R
Sbjct: 259 ETYKMKFGHRGGNQPVKDLKTQKVYITSQNHGFAVRKESLPDDVEVSFINLNDMTVEGIR 318
Query: 207 H*SLPCFCVRY 239
H LP F V++
Sbjct: 319 HKDLPIFSVQF 329
>UniRef50_Q181J3 Cluster: Carbamoyl-phosphate
synthase,pyrimidine-specific, small chain; n=2;
Clostridium difficile|Rep: Carbamoyl-phosphate
synthase,pyrimidine-specific, small chain - Clostridium
difficile (strain 630)
Length = 347
Score = 39.1 bits (87), Expect = 0.050
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 KNISSNKI*IAKSRHSQNV-QLPKNVSCGFTKLYDQTAEGTRH*SLPCFCVRY 239
K + + K+ I H NV ++P+N L D T EG RH LP + V+Y
Sbjct: 274 KCLETGKVFITSQNHGYNVSEMPENTEVTHINLNDNTIEGMRHKELPIYSVQY 326
>UniRef50_Q1IPK5 Cluster: Carbamoyl-phosphate synthase, small
subunit; n=3; Bacteria|Rep: Carbamoyl-phosphate
synthase, small subunit - Acidobacteria bacterium
(strain Ellin345)
Length = 373
Score = 34.7 bits (76), Expect = 1.1
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Frame = +3
Query: 21 ITLRKKTYY*TINFKNGSGRSKNISSNKI*IAKSRHSQNVQ----LPKNVSCGFTKLYDQ 188
+ L KTY G+ KN ++ K+ I H+ V V L D
Sbjct: 269 LALGGKTYKLKFGHHGGNHPVKNNTTGKVEITAHNHNFAVDPDSLKQSEVELTHVDLNDN 328
Query: 189 TAEGTRH*SLPCFCVRY 239
T EG RH SLP F V+Y
Sbjct: 329 TLEGLRHRSLPLFSVQY 345
>UniRef50_Q0CVP6 Cluster: Cholinesterase; n=5; Trichocomaceae|Rep:
Cholinesterase - Aspergillus terreus (strain NIH 2624)
Length = 707
Score = 34.3 bits (75), Expect = 1.4
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 380 TTSAVDKVNFS---LLFILK*IKITCIPFIQVHYIRIIIKTAEPKIYKSFVPNTKTRQRL 210
TT A D V +L L ++I + Q+H RI++ TA+P +Y V N + R+
Sbjct: 635 TTEAKDSVRSIERLILSKLDLVRIRLVDLEQLHLTRIVVSTAQPSVYSRHVENLTYKMRV 694
>UniRef50_Q10656 Cluster: Myoblast growth factor receptor egl-15
precursor; n=7; Caenorhabditis elegans|Rep: Myoblast
growth factor receptor egl-15 precursor - Caenorhabditis
elegans
Length = 1040
Score = 33.9 bits (74), Expect = 1.9
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 261 FCSFYYYSDIMNLNKRYACYFYSFQNKQ*RKIHFVYSACCVELLSKYA*KLI 416
FC ++ + DI +LN C NK+ ++ Y+A E+ SKYA ++I
Sbjct: 129 FCDYFLFPDIHHLNIPMECVCLWKYNKEAKRSDVNYAAVTGEVCSKYASRMI 180
>UniRef50_Q54VU8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1267
Score = 32.7 bits (71), Expect = 4.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 336 FEMNKNNMHTVYSSSLYQNNNKNCRTKN 253
F +N+NN H++ ++ +NNNKN KN
Sbjct: 39 FILNRNNTHSINDNTTNKNNNKNNNNKN 66
>UniRef50_Q0R5A7 Cluster: Putative uncharacterized protein; n=2;
Streptococcus phage MM1|Rep: Putative uncharacterized
protein - Streptococcus phage MM1 1998
Length = 174
Score = 32.3 bits (70), Expect = 5.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 260 PKIYKSFVPNTKTRQRLMASSFRRLVVQLGKS 165
PKIYK F+ N QRL +++ ++ +GKS
Sbjct: 33 PKIYKEFIDNVNQYQRLTGATYEKISNIIGKS 64
>UniRef50_UPI00015BC8BF Cluster: UPI00015BC8BF related cluster; n=1;
unknown|Rep: UPI00015BC8BF UniRef100 entry - unknown
Length = 257
Score = 31.9 bits (69), Expect = 7.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 85 KIY-QVIKYKLQNPDTLKTFNYLRTFHADLPSCTTRRRKELAISLCLVFV 231
K+Y ++ K +N K NY +TF +L C R+ IS LVF+
Sbjct: 51 KLYVDLVDVKKENAILTKELNYYKTFSYELQKCQNEARQLYYISNSLVFI 100
>UniRef50_Q5C0M6 Cluster: SJCHGC07531 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07531 protein - Schistosoma
japonicum (Blood fluke)
Length = 234
Score = 31.9 bits (69), Expect = 7.5
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 171 TKLYDQTAEGTRH*SLPCFCVRYETFINFWFCSFYYYSDIMNLNKRYACYFYSFQNKQ 344
TKL T G S+ C C+ F CSF+ S+ N + RY C + +N+Q
Sbjct: 173 TKLTGITKSGNFRISIVCICIAVWQFFGIIICSFFTCSN-WN-HHRYDCDYQQSKNRQ 228
>UniRef50_A6LJE1 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2; cellular
organisms|Rep: Binding-protein-dependent transport
systems inner membrane component - Thermosipho
melanesiensis BI429
Length = 519
Score = 31.5 bits (68), Expect = 10.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +3
Query: 219 PCFCVRYETFINFWFC----SFYYYSDIMNLNKRY 311
P F + FI WF +F+ YS I N+NK+Y
Sbjct: 110 PIFSFFFSVFITSWFLIPFSTFFIYSHIQNINKKY 144
>UniRef50_Q81WF1 Cluster: Carbamoyl-phosphate synthase small chain;
n=125; Bacteria|Rep: Carbamoyl-phosphate synthase small
chain - Bacillus anthracis
Length = 365
Score = 31.5 bits (68), Expect = 10.0
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 84 KNISSNKI*IAKSRHSQNVQLP--KNVSCGFTK--LYDQTAEGTRH*SLPCFCVRY 239
KNI++ K+ I H V+ +N T L D T EG RH P F V+Y
Sbjct: 274 KNIATGKVAITSQNHGYAVEEESVENTELEITHVALNDGTVEGLRHKKFPAFTVQY 329
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,796,471
Number of Sequences: 1657284
Number of extensions: 7201967
Number of successful extensions: 25651
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25144
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -