Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f06
         (477 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p...    34   0.061
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p...    34   0.061
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr...    34   0.061
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr...    34   0.061
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.       34   0.061
AF016686-2|AAB66239.2|  399|Caenorhabditis elegans Hypothetical ...    31   0.57 
AF016447-1|AAG24019.1|  341|Caenorhabditis elegans Seven tm rece...    30   0.75 
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...    27   9.2  

>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
           protein F58A3.2c protein.
          Length = 1158

 Score = 33.9 bits (74), Expect = 0.061
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +3

Query: 261 FCSFYYYSDIMNLNKRYACYFYSFQNKQ*RKIHFVYSACCVELLSKYA*KLI 416
           FC ++ + DI +LN    C      NK+ ++    Y+A   E+ SKYA ++I
Sbjct: 129 FCDYFLFPDIHHLNIPMECVCLWKYNKEAKRSDVNYAAVTGEVCSKYASRMI 180


>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
           protein F58A3.2e protein.
          Length = 1051

 Score = 33.9 bits (74), Expect = 0.061
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +3

Query: 261 FCSFYYYSDIMNLNKRYACYFYSFQNKQ*RKIHFVYSACCVELLSKYA*KLI 416
           FC ++ + DI +LN    C      NK+ ++    Y+A   E+ SKYA ++I
Sbjct: 129 FCDYFLFPDIHHLNIPMECVCLWKYNKEAKRSDVNYAAVTGEVCSKYASRMI 180


>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
           protein F58A3.2d protein.
          Length = 1096

 Score = 33.9 bits (74), Expect = 0.061
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +3

Query: 261 FCSFYYYSDIMNLNKRYACYFYSFQNKQ*RKIHFVYSACCVELLSKYA*KLI 416
           FC ++ + DI +LN    C      NK+ ++    Y+A   E+ SKYA ++I
Sbjct: 129 FCDYFLFPDIHHLNIPMECVCLWKYNKEAKRSDVNYAAVTGEVCSKYASRMI 180


>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
           protein F58A3.2a protein.
          Length = 1040

 Score = 33.9 bits (74), Expect = 0.061
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +3

Query: 261 FCSFYYYSDIMNLNKRYACYFYSFQNKQ*RKIHFVYSACCVELLSKYA*KLI 416
           FC ++ + DI +LN    C      NK+ ++    Y+A   E+ SKYA ++I
Sbjct: 129 FCDYFLFPDIHHLNIPMECVCLWKYNKEAKRSDVNYAAVTGEVCSKYASRMI 180


>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
          Length = 1040

 Score = 33.9 bits (74), Expect = 0.061
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +3

Query: 261 FCSFYYYSDIMNLNKRYACYFYSFQNKQ*RKIHFVYSACCVELLSKYA*KLI 416
           FC ++ + DI +LN    C      NK+ ++    Y+A   E+ SKYA ++I
Sbjct: 129 FCDYFLFPDIHHLNIPMECVCLWKYNKEAKRSDVNYAAVTGEVCSKYASRMI 180


>AF016686-2|AAB66239.2|  399|Caenorhabditis elegans Hypothetical
           protein R07C3.10 protein.
          Length = 399

 Score = 30.7 bits (66), Expect = 0.57
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +1

Query: 31  VRKPIIKPLILKMEAGGQKIYQVIKYKLQNPDTLKTFNYLRTFHADLPSCTTRRRKEL 204
           +R P +K  +L ++ GG KI ++    L+N     +   L++FH D   CT RR  E+
Sbjct: 215 LRIPRLKLKMLNLKIGGNKIDEIFATLLENGIIDVSSFPLQSFHTD--GCTYRRYPEM 270


>AF016447-1|AAG24019.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 31 protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 0.75
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +1

Query: 190 RRKELAISLCLVFVLGTKLL 249
           R K LA++LCL+FV+GT+ L
Sbjct: 196 RWKSLAVTLCLMFVMGTQFL 215


>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -1

Query: 327 NKNNMHTVYSSSLYQNNNKNCRTKNL*K--FRT*HKNKAETNGEF-LPPSG 184
           NKN++   Y++   Q  N N RT N  K  ++   KN+ E+N  + +P +G
Sbjct: 581 NKNSIFLTYNNG--QKGNDNQRTNNYTKYQYKPPQKNEKESNKPYRIPETG 629


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -1

Query: 327 NKNNMHTVYSSSLYQNNNKNCRTKNL*K--FRT*HKNKAETNGEF-LPPSG 184
           NKN++   Y++   Q  N N RT N  K  ++   KN+ E+N  + +P +G
Sbjct: 581 NKNSIFLTYNNG--QKGNDNQRTNNYTKYQYKPPQKNEKESNKPYRIPETG 629


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,421,433
Number of Sequences: 27780
Number of extensions: 179290
Number of successful extensions: 474
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)