Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5f06
(477 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 0.55
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 1.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 5.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 5.1
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 21 6.8
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 21 6.8
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 21 6.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 6.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 6.8
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 6.8
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 9.0
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 9.0
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.6 bits (51), Expect = 0.55
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2
Query: 308 PFIQVHYIRIIIKTAEPKIYKSFVPNTKTRQRLMASSFRRLVVQLGK 168
P IQ YI + EPKI F P + +Q++ +V LGK
Sbjct: 628 PRIQT-YIMALGMIGEPKILSVFEPYLEGKQQMTVFQRTLMVGSLGK 673
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 327 NKNNMHTVYSSSLYQNNNKNCRTKN 253
N NN Y+++ Y NNN N N
Sbjct: 325 NNNNYKYNYNNNNYNNNNYNNNYNN 349
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 330 MNKNNMHTVYSSSLYQNNNKN 268
++ NN Y+++ Y NNN N
Sbjct: 89 IHNNNYKYNYNNNNYNNNNYN 109
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 330 MNKNNMHTVYSSSLYQNNNKN 268
++ NN Y+++ Y NNN N
Sbjct: 89 IHNNNYKYNYNNNNYNNNNYN 109
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 181 TTRRRKELAISLCL 222
T RRR E+A +LCL
Sbjct: 34 TRRRRIEIAHALCL 47
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 181 TTRRRKELAISLCL 222
T RRR E+A +LCL
Sbjct: 34 TRRRRIEIAHALCL 47
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 181 TTRRRKELAISLCL 222
T RRR E+A +LCL
Sbjct: 34 TRRRRIEIAHALCL 47
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 6.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 21 ITLRKKTYY*TIN 59
ITLR+KT + T+N
Sbjct: 230 ITLRRKTLFYTVN 242
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 6.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 21 ITLRKKTYY*TIN 59
ITLR+KT + T+N
Sbjct: 229 ITLRRKTLFYTVN 241
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 181 TTRRRKELAISLCL 222
T RRR E+A +LCL
Sbjct: 296 TRRRRIEIAHALCL 309
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.6 bits (41), Expect = 9.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 72 SGRSKNISSNKI*IAKSRHSQNV 140
SGR N N+ +A S +QNV
Sbjct: 364 SGRVNNTQRNEYLLALSDRNQNV 386
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 20.6 bits (41), Expect = 9.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 3 SKMHHRITLRKKTYY*TIN 59
S + IT+R+KT + T+N
Sbjct: 237 SDITFNITMRRKTLFYTVN 255
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,562
Number of Sequences: 438
Number of extensions: 2385
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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