Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f04
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   1.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 394 EQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSR 507
           ++LTVD    E + Q   K  +++G P   R  ++ ++
Sbjct: 735 KKLTVDFSAREWVKQGAPKEKLMIGMPTYGRSFELVNK 772


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 140 KWVAFSRKISKW*KTCMTCHRFVGCR*SLLTAF 238
           ++VAF RKI KW    +      GC   L  AF
Sbjct: 291 QFVAFRRKIYKWNHGLLQGDPLSGCLCELYMAF 323


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 343 VRGRMVAEKIRTLEDLPEQLTVDLIKEEMLSQP 441
           VRGR+VA+ +    D P      L+K E  + P
Sbjct: 513 VRGRLVAKPVADARDAPAPF---LLKRENYTLP 542


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 357 HSPSDRVPCSLDSFQFARPD 298
           H  +D+V C + S+   RPD
Sbjct: 20  HGATDKVICYVASWAIYRPD 39


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 242 PGTPLTKITGSRRTGDMSYKSSTTS 168
           PG P T  T    +   S  SST+S
Sbjct: 154 PGKPATSTTSQNLSSPASSTSSTSS 178


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 39  IEHIFILCYFTYVP**FYESVIYLSI 116
           ++ +F+ CYF Y+   F    IY S+
Sbjct: 141 LQLVFVFCYFIYL---FTVYYIYYSV 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,134
Number of Sequences: 336
Number of extensions: 3373
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)