Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5f03
(494 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 250 1e-65
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 236 2e-61
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 167 9e-41
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 147 1e-34
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 123 3e-27
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 116 3e-25
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 109 3e-23
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 109 4e-23
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 108 8e-23
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 107 1e-22
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 105 5e-22
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 101 7e-21
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 101 9e-21
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 97 2e-19
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 92 5e-18
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 88 9e-17
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 86 5e-16
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 81 2e-14
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 75 7e-13
UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n... 75 7e-13
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 75 7e-13
UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1; uncul... 73 5e-12
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 72 6e-12
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 60 2e-08
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 52 9e-06
UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole geno... 49 7e-05
UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia... 46 6e-04
UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycopla... 41 0.013
UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, wh... 37 0.22
UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4; Endopterygota|... 36 0.66
UniRef50_A0NKF0 Cluster: Rhamnosyltransferase; n=1; Oenococcus o... 34 1.5
UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta hyd... 34 1.5
UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium lot... 33 2.7
UniRef50_A6LHC7 Cluster: Putative outer membrane protein, probab... 33 2.7
UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 33 2.7
UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatu... 33 4.6
UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component... 33 4.6
UniRef50_A6LXE0 Cluster: Putative uncharacterized protein precur... 33 4.6
UniRef50_Q6UVP6 Cluster: Ribosomal protein S13; n=1; Pseudendocl... 28 6.1
UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus laev... 32 6.1
UniRef50_A6CG73 Cluster: Putative uncharacterized protein; n=1; ... 32 6.1
UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, wh... 32 6.1
UniRef50_Q7RQE1 Cluster: Protein factor associated with neutral-... 32 8.1
UniRef50_A7S3C9 Cluster: Predicted protein; n=1; Nematostella ve... 32 8.1
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 250 bits (613), Expect = 1e-65
Identities = 118/152 (77%), Positives = 130/152 (85%)
Frame = +3
Query: 39 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 218
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 219 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 398
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 399 RGMRHYWGLRVXXXXXXXXXXXXXXXXVSXKK 494
RG+RHYWGLRV VS KK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 236 bits (578), Expect = 2e-61
Identities = 108/152 (71%), Positives = 128/152 (84%)
Frame = +3
Query: 39 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 218
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 219 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 398
E+EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 399 RGMRHYWGLRVXXXXXXXXXXXXXXXXVSXKK 494
RG+RH+WGLRV VS KK
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 167 bits (407), Expect = 9e-41
Identities = 79/131 (60%), Positives = 106/131 (80%)
Frame = +3
Query: 39 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 218
MSLVI +K QHIL+++NTNID +++ FA+TA KG +RY+++VL+KA IDL K AGE T
Sbjct: 1 MSLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELT 60
Query: 219 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 398
E++VE++ITIM NPRQY+IP QK + DG+ SQ+ ++ LD+KLRE+LERLKKIRAH
Sbjct: 61 EDKVERVITIMQNPRQYEIP------QKGVRDGRCSQVPANGLDNKLREELERLKKIRAH 114
Query: 399 RGMRHYWGLRV 431
RG+RH+WGL V
Sbjct: 115 RGLRHFWGLHV 125
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 147 bits (357), Expect = 1e-34
Identities = 69/133 (51%), Positives = 96/133 (72%), Gaps = 2/133 (1%)
Frame = +3
Query: 39 MSLVIPDK--FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 212
MS VI + F++I RI+NTNIDGKR A+T I+G+GRR++ I+ K ID + RAG
Sbjct: 1 MSFVIEKESDFKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGL 60
Query: 213 CTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIR 392
TE++ KI ++++P + IP W LNR D DGK Q+ S+ LD+K+REDLERLKKI+
Sbjct: 61 LTEDQCNKITDLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIK 120
Query: 393 AHRGMRHYWGLRV 431
+HRG+RH+WGL+V
Sbjct: 121 SHRGLRHFWGLKV 133
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 123 bits (296), Expect = 3e-27
Identities = 56/130 (43%), Positives = 85/130 (65%)
Frame = +3
Query: 42 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 221
++V P+ ++ +LR+ NTNI GK + A+ IKG+GRR++N+ LKKA+ID+ KRAGE T
Sbjct: 3 TIVQPNDYRDLLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTA 62
Query: 222 EEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 401
E + ++ ++ +P + IP W LNR D GK + + + S R DLERL+K R R
Sbjct: 63 AEEDALMKVLEDPLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCER 122
Query: 402 GMRHYWGLRV 431
G+RH+ L+V
Sbjct: 123 GVRHHHNLKV 132
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 116 bits (279), Expect = 3e-25
Identities = 50/126 (39%), Positives = 89/126 (70%)
Frame = +3
Query: 54 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 233
P F+ ++R+++TN+DG+R + A+T I G+GRR++ V+++A +D +RAG T +E E
Sbjct: 8 PAAFRDMVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEE 67
Query: 234 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 413
I++I+ NP +++IP W LNR+ D G+ + +++L + +R ++ER+KK+R RG+RH
Sbjct: 68 LIVSIIQNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRH 127
Query: 414 YWGLRV 431
GL+V
Sbjct: 128 GLGLKV 133
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 109 bits (262), Expect = 3e-23
Identities = 57/134 (42%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
Frame = +3
Query: 39 MSLVIP--DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 212
MSLV+ D+F+ I+RI+NTN+DGK+++ + + +IKG+GRR++ + K ++L KRAGE
Sbjct: 1 MSLVLEKADQFRQIIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGE 60
Query: 213 CTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIR 392
T+EE KI ++ QY +D+ +GK ++T++ L++KLREDLER+KKI+
Sbjct: 61 LTDEEAHKITEVIKMVPQY---------IRDLKNGKNYEVTTNELETKLREDLERIKKIK 111
Query: 393 AHRG--MRHYWGLR 428
+ +RH+WGLR
Sbjct: 112 YSQWLCLRHHWGLR 125
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 109 bits (261), Expect = 4e-23
Identities = 58/147 (39%), Positives = 86/147 (58%)
Frame = +3
Query: 54 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 233
P + Q+I+RI NTNIDG +++ FA+T I+G+G R + + K+ IDL KRAGE E+E++
Sbjct: 7 PAEVQYIVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMK 66
Query: 234 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 413
+I + +P IP+ ++N Q+DI+DG S L + LD+ LR +ER KK + R R
Sbjct: 67 RISDAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRL 126
Query: 414 YWGLRVXXXXXXXXXXXXXXXXVSXKK 494
GL+V VS KK
Sbjct: 127 DVGLKVRGQRTKSNGRRGRSMGVSRKK 153
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 108 bits (259), Expect = 8e-23
Identities = 48/122 (39%), Positives = 82/122 (67%)
Frame = +3
Query: 60 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 239
+F++++R+ T++DG +K++ A+ I GVG + +++ A +D +K AG TEEEV+KI
Sbjct: 5 EFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKI 64
Query: 240 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 419
++++P ++ IP W NR+KD V G+ + S+L +ED+ RLK+IR +RG+RH
Sbjct: 65 EEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHEL 124
Query: 420 GL 425
GL
Sbjct: 125 GL 126
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 107 bits (258), Expect = 1e-22
Identities = 54/146 (36%), Positives = 82/146 (56%)
Frame = +3
Query: 57 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 236
++ +H++RIMNT++ G + V +A+T + GVGRR + ++ K A +D G EEEV K
Sbjct: 18 EELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAK 77
Query: 237 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 416
+ T + +P W LNRQKD+ G+ L +++ RED+ LKK+RA+RG+RH
Sbjct: 78 LDTAIGKFEDI-VPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHE 136
Query: 417 WGLRVXXXXXXXXXXXXXXXXVSXKK 494
GL+V VS KK
Sbjct: 137 RGLKVRGQRTKSTGRRGSTVGVSRKK 162
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 105 bits (252), Expect = 5e-22
Identities = 44/123 (35%), Positives = 86/123 (69%)
Frame = +3
Query: 63 FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKII 242
FQ+I+RI N +++G+R + A++ +KG+G R ++ ++ D+ +DK+ GE EE++EK+
Sbjct: 28 FQYIVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLR 87
Query: 243 TIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWG 422
+ ++Y +P+W LN +++ V GK L S++L+ +++ED+ +KKIR+++G+RH G
Sbjct: 88 EYV-EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKG 146
Query: 423 LRV 431
+V
Sbjct: 147 KKV 149
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 101 bits (243), Expect = 7e-21
Identities = 47/125 (37%), Positives = 80/125 (64%)
Frame = +3
Query: 57 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 236
D+ ++I+RI NT++DG + V FA+T IKG+G R S I+ ++A +D G E+V+K
Sbjct: 67 DEIKYIVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDK 126
Query: 237 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 416
+ ++ N + +P W LNR++DI G+ L +L ++ED+ +KKIR+++G+RH
Sbjct: 127 LRAVIDN-LEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHE 185
Query: 417 WGLRV 431
G +V
Sbjct: 186 RGQKV 190
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 101 bits (242), Expect = 9e-21
Identities = 44/124 (35%), Positives = 81/124 (65%)
Frame = +3
Query: 60 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 239
+F++I+R+ ++DG KV +A+ +KG+G + ++ K +D D+R GE ++E+++KI
Sbjct: 6 QFKYIVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKI 65
Query: 240 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 419
+++ + ++P+W NR+KD G L +S+L +R D+ER KKI++ RG+RH
Sbjct: 66 ENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSL 125
Query: 420 GLRV 431
GL+V
Sbjct: 126 GLKV 129
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 97.1 bits (231), Expect = 2e-19
Identities = 40/118 (33%), Positives = 76/118 (64%)
Frame = +3
Query: 60 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 239
+F+H +RI T+++GK + +A+ +KG+GR + V++ ++D ++AG +E+V KI
Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKI 64
Query: 240 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 413
+++ +P + IP W NR+KD+ G L ++L ++ED+ +KKIR ++G+RH
Sbjct: 65 ESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRH 122
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 92.3 bits (219), Expect = 5e-18
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +3
Query: 135 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIP 278
IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 88.2 bits (209), Expect = 9e-17
Identities = 38/124 (30%), Positives = 75/124 (60%)
Frame = +3
Query: 60 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 239
+++HI+RI+ ++ G++K + + I+G+G ++ +L ID + G T+E+V I
Sbjct: 50 EYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASI 109
Query: 240 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 419
++ +P P WFLNR+KD+ G+ + +S+++ +R D+ER + + +G RH +
Sbjct: 110 EKLLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMF 169
Query: 420 GLRV 431
GL+V
Sbjct: 170 GLKV 173
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 85.8 bits (203), Expect = 5e-16
Identities = 39/125 (31%), Positives = 74/125 (59%)
Frame = +3
Query: 57 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 236
+ ++ +RI T++DG + V A+T + G+G R + I+ +KAD+D G+ ++ +E+
Sbjct: 18 EDIRYFVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIER 77
Query: 237 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 416
++ + N +P+W N QKD G+ + T ++L R+D+ R+K I ++RG+RH
Sbjct: 78 VVERVENFAD-DVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHK 136
Query: 417 WGLRV 431
G +V
Sbjct: 137 RGQKV 141
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 80.6 bits (190), Expect = 2e-14
Identities = 38/119 (31%), Positives = 67/119 (56%)
Frame = +3
Query: 57 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 236
+K +RI + NI+G F + IKGVG R SN++ K D++ + + ++E+
Sbjct: 13 EKSMTFIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEE 72
Query: 237 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 413
++ I + P W +NR+ D + G + S+ LDS L+ED++RL I+ ++G+RH
Sbjct: 73 VVNIFGKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRH 131
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 75.4 bits (177), Expect = 7e-13
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = +3
Query: 294 RQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 431
++KD DG++SQ+ S+ LD KLR+DLERLKKIR HRG+RHYWGLRV
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 124
>UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 272
Score = 75.4 bits (177), Expect = 7e-13
Identities = 42/135 (31%), Positives = 70/135 (51%)
Frame = -1
Query: 443 VLTTHTKAPVMSHPSVSANLLEPLQIFTEF*IQVGGGQLAVFTINNILLPI*EPVWYLIL 264
VLTT T APV+S SV +NLL+ L++ + +++ G L I I+L + EP+ L
Sbjct: 44 VLTTDTDAPVVSQTSVVSNLLQTLEVVAQLRVELVGHHLRELAILEIVLAVQEPIRNSEL 103
Query: 263 PRIRHDSDNFFNLFFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDVRIH 84
R+ HD F L L +I++ F + VG A+ D H+L ++V +
Sbjct: 104 SRVGHDHHQRFQLRGGELPGALPEIDLSLFAHQVGEAAADPLDLGQGVHHLLTTVNVGVE 163
Query: 83 DTKNMLKFVWNDQRH 39
D ++L+ + +D+ H
Sbjct: 164 DADDVLEIITDDEAH 178
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 75.4 bits (177), Expect = 7e-13
Identities = 38/120 (31%), Positives = 69/120 (57%)
Frame = +3
Query: 72 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 251
I+R+ +T+++G ++V +A+ I+G+G + + K ID G EE++ K+ +
Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67
Query: 252 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 431
N + P WFLNR+KD G+ L S L + D++ +KK+++ +G+RH GL+V
Sbjct: 68 RNLHEVA-PAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKV 126
>UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1;
uncultured euryarchaeote ARMAN-2|Rep: SSU ribosomal
protein S13AB - uncultured euryarchaeote ARMAN-2
Length = 177
Score = 72.5 bits (170), Expect = 5e-12
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Frame = +3
Query: 60 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN----IVLKKADIDLDKRAGECTEEE 227
K I+RI N +I+G + A+ +KG+G+ S+ ++ K +ID G E +
Sbjct: 15 KAMSIVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQ 74
Query: 228 VEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGM 407
V ++ ++ +P +Y +P + LNR+ D+ GK L ++L +R+ + R +R RG
Sbjct: 75 VTQVEELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGY 134
Query: 408 RHYWGLRV 431
RH +G +V
Sbjct: 135 RHQYGQKV 142
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 72.1 bits (169), Expect = 6e-12
Identities = 36/120 (30%), Positives = 64/120 (53%)
Frame = +3
Query: 72 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 251
I+ I + ++DG + + + + GV +++ V ID ++ G ++EE+EK+ +
Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72
Query: 252 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 431
NP +Y IP W NR++D GK L ++ + D++R +I + RG RH GL V
Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3
Query: 249 MSNPRQYKIPDWFLNRQKDIVDGKYSQL 332
M NPRQYKIPDWFLNRQKD+ DGKYSQ+
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQV 28
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 51.6 bits (118), Expect = 9e-06
Identities = 41/118 (34%), Positives = 61/118 (51%)
Frame = +3
Query: 78 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSN 257
RI+ + +KV A+T I G+GR S +LK ID +KR G+ T+EE+ KI
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKI------ 56
Query: 258 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 431
+Y I D F V+G+ L S++ ++ RL +I +RG+RH GL V
Sbjct: 57 -TKY-IQDHFK------VEGE--------LRSEVERNIRRLIEIGCYRGIRHKLGLPV 98
>UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 48
Score = 48.8 bits (111), Expect = 7e-05
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 29 LNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDGYQRCWP 151
L+ +V G R IST++S ++E RW+T+ +VC D +QR WP
Sbjct: 5 LSMSVLGSERGISTHTSCAQHERRWETEDHVCSDLHQRYWP 45
>UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_7513_8304 - Giardia lamblia ATCC
50803
Length = 263
Score = 45.6 bits (103), Expect = 6e-04
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Frame = -1
Query: 443 VLTTHTKAPVMSHPSVSANLLEPLQIFTEF*IQVGGG---QLAVFTINNILLPI*EPVWY 273
VL + + V++ +++A+ E LQ+ T + G G + VF I++ I P W
Sbjct: 29 VLPANLQVVVVADTALAASFTETLQVRT---VGRGYGIDQNVHVFARFKIIVTIKHPGWN 85
Query: 272 LILPRIRHDSDNFFNLFFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDV 93
+ + D L C S V +NVGF E N+G N +S A+DV
Sbjct: 86 AVGEGVLKDLHESILLGRCELTSAFVNVNVGFLEGNIGKAAPNPLNSDKGTLKYDLALDV 145
Query: 92 RIHDTKNMLKFV-WNDQRH 39
+ T+ + V ND+ H
Sbjct: 146 CVKHTQEVPVVVGLNDRCH 164
>UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S13 -
Mycoplasma hyopneumoniae (strain 232)
Length = 137
Score = 41.1 bits (92), Expect = 0.013
Identities = 28/119 (23%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = +3
Query: 78 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMS- 254
R++N I ++++ A+ +I G+G+ + +++K + EE+ K I++
Sbjct: 3 RVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKT--------AKLQEEKFGKKFPILTE 54
Query: 255 NPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 431
N + +I + L +D+ + T +L +++ +++RL +I+ +RG+RH GL V
Sbjct: 55 NTKVKEINEEVLQVIRDVAK---TYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPV 110
>UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 367
Score = 37.1 bits (82), Expect = 0.22
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 156 YSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDG 317
Y N + D + DK + E ++E E++IT++ + KI DW +KD+ DG
Sbjct: 93 YQNAIDSAQD-EKDKYSRETLQKEKEELITLICEMKHSKIEDWLKTIKKDLPDG 145
>UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4;
Endopterygota|Rep: ENSANGP00000013280 - Anopheles
gambiae str. PEST
Length = 183
Score = 35.5 bits (78), Expect = 0.66
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 96 IDGKRKVMFAMTAIKGVGRRYSNIVLK---KADI-DLDKRAGECTEEEVEK 236
+D K KV A G+GR +S +LK K I DLD AGE T EE+EK
Sbjct: 1 MDLKNKVALVTGAATGLGRAFSEELLKHGAKVVICDLDSDAGELTVEELEK 51
>UniRef50_A0NKF0 Cluster: Rhamnosyltransferase; n=1; Oenococcus oeni
ATCC BAA-1163|Rep: Rhamnosyltransferase - Oenococcus
oeni ATCC BAA-1163
Length = 311
Score = 34.3 bits (75), Expect = 1.5
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 66 QHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIIT 245
QH ++ T + K +F + I + Y N + KK +L K GEC +E I
Sbjct: 215 QHSSNVVGTTGNNLFKKIFKIREI--FNKFYKNGLFKKQANELLKNYGECLSKEKRNAIN 272
Query: 246 I-MSNPRQYKIPDWFLNRQK 302
I +S+ RQ K W L + K
Sbjct: 273 IFLSSNRQLKEVFWILKKIK 292
>UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta
hydrolase superfamily; n=2; Cryptosporidium|Rep:
COG1752: esterase of the alpha-beta hydrolase
superfamily - Cryptosporidium hominis
Length = 794
Score = 34.3 bits (75), Expect = 1.5
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +3
Query: 57 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 236
+ F +L+ +N +I K + + + SN K DK+ + E
Sbjct: 645 NSFVVVLKSLNDDIQRLNKTLITIDSFLKSSNNISNKATKLLKYIEDKQKKGIFSAKFED 704
Query: 237 IITIMSNPRQYK-----IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKI 389
+IT++S Y I +N ++ IVD K+SQL + + LRE E K+
Sbjct: 705 VITLLSLYEDYVEKLQGIRIKEINSRRIIVDSKHSQLILARIIIALREQNEHFPKL 760
>UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium
loti|Rep: Mll1963 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 315
Score = 33.5 bits (73), Expect = 2.7
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -1
Query: 215 AFASTLVKINVGFFENNVG-VPPANTFDSRHRK-HNLAFAIDVRIHDTKNML 66
AFA T V+ VGF++ VG + +D +K H+ AF DV + DTK L
Sbjct: 23 AFAETPVEPTVGFYKYTVGDIEVTAIYDGIWKKPHDPAFIKDVSVEDTKAAL 74
>UniRef50_A6LHC7 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Parabacteroides
distasonis ATCC 8503|Rep: Putative outer membrane
protein, probably involved in nutrient binding -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 531
Score = 33.5 bits (73), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 153 RYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDW 284
RYS ++ KA+ + K G+ T+E V+ I ++ R +K DW
Sbjct: 410 RYSEVIYNKAEALMRKNGGKATQEVVDMINSV--RQRSFKAEDW 451
>UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Flavobacterium johnsoniae UW101|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Flavobacterium johnsoniae
UW101
Length = 216
Score = 33.5 bits (73), Expect = 2.7
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +3
Query: 54 PDKFQHILRIMNT--NIDGKRKVMFAMTAIKGVGRRYSNIVLKKAD 185
P K Q +L I +T N + M +TA+KG+GR+ +N++L++ +
Sbjct: 87 PTKAQWLLEIAHTIQNDNDIPLTMSGLTALKGIGRKSANVILRETE 132
>UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatus
Ellin6076|Rep: Trigger factor - Solibacter usitatus
(strain Ellin6076)
Length = 422
Score = 32.7 bits (71), Expect = 4.6
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 198 KRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQ-KDIVDGKYSQLTSSNLD-SKLREDL 371
+R E +E KI+ + + ++ +P+ F+ RQ ++ V+ + +D SKL+ D
Sbjct: 272 QRQYEAQQEAKNKIVDKLVDAHEFPVPEVFVERQIRNRVEQSLRAMAEQGVDPSKLKLDW 331
Query: 372 ERLKKIRAHRGMR 410
E++K+ + + R
Sbjct: 332 EKVKEAQREKATR 344
>UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component
NapD; n=1; Sulfurovum sp. NBC37-1|Rep: Periplasmic
nitrate reductase component NapD - Sulfurovum sp.
(strain NBC37-1)
Length = 119
Score = 32.7 bits (71), Expect = 4.6
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 207 GECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSN-LDSKLREDLERLK 383
G+ EEE+EK++ I P D + Q+D +D + +L N + L +D ++
Sbjct: 46 GKGVEEEIEKLVKIQRLPNVI-AADMMMTYQEDELDAEVKRLEEENPVPDVLNDDDIDVR 104
Query: 384 KIRAHRGMRH 413
+ H +RH
Sbjct: 105 DVEYHGDLRH 114
>UniRef50_A6LXE0 Cluster: Putative uncharacterized protein
precursor; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Putative uncharacterized protein precursor - Clostridium
beijerinckii NCIMB 8052
Length = 445
Score = 32.7 bits (71), Expect = 4.6
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +3
Query: 144 VGRRYSNIVLKKADIDLDKRAGECTEEEVE----KIITIMSNPRQYKIPDWFLNRQKDIV 311
V +RY+ I+LKK DID K E +++ K+ ++ P Q + LN+ +D +
Sbjct: 148 VTKRYNAIILKKIDIDKLKTGLEIKNNDLDALKIKVSVGLAIPNQLEDKQIELNKAQDEI 207
Query: 312 DGKYSQLTSSNLD 350
K + L +NLD
Sbjct: 208 KAKENSL-KNNLD 219
>UniRef50_Q6UVP6 Cluster: Ribosomal protein S13; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S13 -
Pseudendoclonium akinetum (Green alga)
Length = 119
Score = 27.9 bits (59), Expect(2) = 6.1
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 81 IMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 233
++ +N+ + FA+ AI GVG++ + V I+ R E ++E
Sbjct: 3 LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLE 53
Score = 23.4 bits (48), Expect(2) = 6.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 297 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 413
Q +++ +L +SN + E ++ L KI +RG RH
Sbjct: 51 QLELLTKSCRRLIASNKKREKVEAIKSLIKISCYRGTRH 89
>UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus
laevis|Rep: LOC100037042 protein - Xenopus laevis
(African clawed frog)
Length = 384
Score = 32.3 bits (70), Expect = 6.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 240 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLK 383
+ I ++ KIPD LN + V +S+ + N +S+L+ D +R+K
Sbjct: 6 VGIHKEEQEQKIPDPLLNGDAEDVPQHFSETPTCNTESRLQADQQRIK 53
>UniRef50_A6CG73 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 562
Score = 32.3 bits (70), Expect = 6.1
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Frame = +3
Query: 93 NIDGKRKVMFAMTAIKGVGRRYSN-IVLKKADIDLDKRAGECTEEEVEKIITIMSNPR-- 263
N GK K++ + GR + N ++L+ D + E EE++ + I+ PR
Sbjct: 32 NNSGKSKILKEIRRFCSEGRSHPNDLILEHLTFDQNNTPDEIPEEQIHLLKNIIQQPRDH 91
Query: 264 QYKIPDWFL----NRQKDIVDGK-YSQLTSSNLDS 353
++ IP + +++K + + K +S + N+DS
Sbjct: 92 EHTIPGYIYVGDKSKRKHVDERKLFSAFSKPNIDS 126
>UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_70,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 713
Score = 32.3 bits (70), Expect = 6.1
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 156 YSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQK 302
Y + +K ++D K C ++E+EK + SNP + W + +K
Sbjct: 533 YMKVQGQKNELDFHKLINSCLDKEIEKNLKNFSNPATIDLYPWMIKYRK 581
>UniRef50_Q7RQE1 Cluster: Protein factor associated with
neutral-sphingomyelinase activation; n=3; Plasmodium
(Vinckeia)|Rep: Protein factor associated with
neutral-sphingomyelinase activation - Plasmodium yoelii
yoelii
Length = 1490
Score = 31.9 bits (69), Expect = 8.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 188 NVGFFENNVGVPPANTFDSRHRKHNL 111
N+ F NN PP NTF+ ++K+N+
Sbjct: 1189 NLSQFSNNCATPPINTFEKENQKYNV 1214
>UniRef50_A7S3C9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 31.9 bits (69), Expect = 8.1
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 210 ECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTS--SNLDSKLREDLERLK 383
E TE V K + I N + Y+ DW LN V+G + D KL LER K
Sbjct: 31 ELTETPVRKAMFIQVN-QTYEETDWILNLPD--VNGTLEGIVGWVDLQDPKLESILERYK 87
Query: 384 KIRAHRGMRH 413
K RG+R+
Sbjct: 88 KFPKFRGVRN 97
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,767,756
Number of Sequences: 1657284
Number of extensions: 9777264
Number of successful extensions: 29828
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 29067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29812
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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