Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5f02
         (459 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   2.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    20   9.6  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 195 SSFTKLQVLKPQEICSKSYFYHWWPPYFLVSEFYSCCYG 311
           +S  KLQ  +P + C + + Y       +  +FY C  G
Sbjct: 93  TSRPKLQEPQPSQHCPRKHGYFAHEEPHICDKFYYCVDG 131


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 246 SYFYHWWPPYFLVSEFY 296
           +YF+++W   F  S+F+
Sbjct: 66  AYFFNFWTILFSRSDFF 82


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 30  EFYWFCFL*CFVL 68
           EFY FC+L   +L
Sbjct: 171 EFYGFCYLWVLIL 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,996
Number of Sequences: 336
Number of extensions: 2452
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)