Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e24
         (511 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K3D7 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_Q31MP8 Cluster: Putative uncharacterized protein precur...    32   6.6  
UniRef50_Q53840 Cluster: Soraphen polyketide synthase B; n=2; ce...    32   6.6  
UniRef50_A4F5C6 Cluster: Polyketide synthase; n=5; Bacteria|Rep:...    32   6.6  
UniRef50_UPI00015B4145 Cluster: PREDICTED: similar to conserved ...    32   8.7  

>UniRef50_A5K3D7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 2124

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 189 ACQPAPNWYMRRTAWRESPPLMGVPRQLAAGLRASVQLTNR 311
           A +P   W  RR  W E PP  G+ +    G+R+      R
Sbjct: 867 ALKPKVYWSKRRPFWEEKPPKRGIAKNRQEGMRSGTNTDER 907


>UniRef50_Q31MP8 Cluster: Putative uncharacterized protein
           precursor; n=1; Synechococcus elongatus PCC 7942|Rep:
           Putative uncharacterized protein precursor -
           Synechococcus sp. (strain PCC 7942) (Anacystis nidulans
           R2)
          Length = 166

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 162 LNNWL-DVTLACQPAPNWYMRRTAWRESPPLMGVPRQLAA 278
           ++ WL  + L   PAP+W    TAW + PP   V + L A
Sbjct: 3   ISGWLLPIALLGLPAPSWAQSNTAWLDQPPPSRVLQPLEA 42


>UniRef50_Q53840 Cluster: Soraphen polyketide synthase B; n=2;
            cellular organisms|Rep: Soraphen polyketide synthase B -
            Polyangium cellulosum (Sorangium cellulosum)
          Length = 8817

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +2

Query: 179  CNLGLSAGTKLVHETD-----SLARESAPDGRSKTTSSRTESFSAAD 304
            CNL L+AG  ++   +     S  R  APDGRSKT S+  + +   +
Sbjct: 1779 CNLALAAGVSVMASPEGFVLLSRLRALAPDGRSKTFSANADGYGRGE 1825



 Score = 31.9 bits (69), Expect = 8.7
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = +2

Query: 179  CNLGLSAGTKLVHETDSLA-----RESAPDGRSKTTSSRTESFSAAD 304
            CNL L+AG  L+    +       R  APDGRSKT S   + +   +
Sbjct: 6965 CNLALAAGVSLMVSPQTFVILSRLRALAPDGRSKTFSDNADGYGRGE 7011


>UniRef50_A4F5C6 Cluster: Polyketide synthase; n=5; Bacteria|Rep:
            Polyketide synthase - Polyangium cellulosum (Sorangium
            cellulosum)
          Length = 5331

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = +2

Query: 179  CNLGLSAGTKLVHETD-----SLARESAPDGRSKTTSSRTESFSAAD 304
            C+L L+AG +++   +     S  R  APDGRSKT S+  + F   +
Sbjct: 1790 CDLALAAGAQVMASPEAFVLLSRTRALAPDGRSKTFSANADGFGRGE 1836


>UniRef50_UPI00015B4145 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 535

 Score = 31.9 bits (69), Expect = 8.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 296 H*SSQSGC*LSWNAHQGRTLAPSCPSHVPVW 204
           H + +S C +SW  + GR LA +C + V VW
Sbjct: 196 HSAQKSVCCMSWRPNAGRELAAACQNGVLVW 226


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,199,944
Number of Sequences: 1657284
Number of extensions: 7904535
Number of successful extensions: 27360
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26770
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)