Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e24
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.4  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 138 EKFNVNTELNNWLDVTLACQP 200
           EK NVN  L  W+D    C P
Sbjct: 241 EKLNVNDGLQLWVD--YGCSP 259


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 162 LNNWLDVTLACQPAPNWYMRR 224
           L++WL   L     P W  RR
Sbjct: 107 LHSWLGTGLLTSAGPKWQNRR 127


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 162 LNNWLDVTLACQPAPNWYMRR 224
           L++WL   L     P W  RR
Sbjct: 107 LHSWLGTGLLTSRGPKWQNRR 127


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = -3

Query: 227 CPSHVPVWCRLTSQGYIEPVVQLRIHIKFFCFSFSFLI 114
           CP   P++  ++     E +   R+H +F   S   L+
Sbjct: 37  CPKPAPIYSPVSKPVSFESLPNRRLHEEFLRSSVDVLL 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,050
Number of Sequences: 336
Number of extensions: 1935
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)