Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e14
         (674 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5V137 Cluster: Putative acetyltransferase; n=1; Haloar...    34   3.6  
UniRef50_Q47EQ3 Cluster: Regulatory protein GntR, HTH:Aminotrans...    33   4.8  

>UniRef50_Q5V137 Cluster: Putative acetyltransferase; n=1;
           Haloarcula marismortui|Rep: Putative acetyltransferase -
           Haloarcula marismortui (Halobacterium marismortui)
          Length = 174

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 22/74 (29%), Positives = 38/74 (51%)
 Frame = +3

Query: 360 DLLTYVYAPYWGQEMMRELV*RAA*RRHSVSVLAIKPKEIQERILNHLCLLPAHVEKASK 539
           DL  YV+  YWG+ +  EL+ R     H +SV  I+ + + E  + +     AH EK  +
Sbjct: 97  DLDLYVHPDYWGEGIGTELLHRGEQHLHDLSVRKIRDEVLAENEVGN-AFYRAHFEKVGQ 155

Query: 540 LQERQLNVQKNVVN 581
            +  ++  Q++ VN
Sbjct: 156 -RTAKVGGQEHPVN 168


>UniRef50_Q47EQ3 Cluster: Regulatory protein GntR,
           HTH:Aminotransferase, class I and II; n=1; Dechloromonas
           aromatica RCB|Rep: Regulatory protein GntR,
           HTH:Aminotransferase, class I and II - Dechloromonas
           aromatica (strain RCB)
          Length = 476

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = -1

Query: 341 AVAIPLRVSSSPCNP*CMSLLAHFITAGS*ALDIYERHFRTLRDSY 204
           AVA+   +SS   NP    +LA ++ +G+     Y+RH RTLR +Y
Sbjct: 337 AVALHKTISSGGTNPITQHVLAEYLESGA-----YDRHLRTLRRAY 377


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,905,950
Number of Sequences: 1657284
Number of extensions: 11326517
Number of successful extensions: 27247
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27244
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)