Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e14
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.57 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   4.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 136 PSREGWYSLSSVLTPLIDAWQMLKNIGWFSSLN 38
           P REG+Y+ +       +   ML N GW   ++
Sbjct: 441 PGREGFYTQNPGFLAYFEICDMLLNEGWHKGMD 473


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory
          receptor candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 52 FSSLNLKFNFVDKSM 8
          +SSLN  F F+DK +
Sbjct: 46 WSSLNKNFQFIDKKL 60


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 289 MHHGLQGDEETRRGIATAI 345
           +HH   G+EE  R  A A+
Sbjct: 263 VHHKCGGEEEAERAPAPAV 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,934
Number of Sequences: 336
Number of extensions: 2749
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)