Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e14
         (674 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0105 - 20861130-20861384,20861472-20862262,20862364-208626...    36   0.022
03_05_0100 - 20779387-20779641,20779824-20780629,20780757-207810...    33   0.21 
06_01_0757 + 5659081-5659605,5659694-5659919,5659994-5660333,566...    29   3.4  
03_01_0392 + 3051469-3051876,3052414-3052832,3053992-3054061,305...    29   3.4  
09_06_0327 + 22359524-22359602,22359732-22359835,22362073-223622...    29   4.5  
03_05_0101 - 20803546-20803800,20803907-20804700,20804788-208050...    29   4.5  
03_04_0154 - 17749569-17749868                                         29   4.5  

>03_05_0105 -
           20861130-20861384,20861472-20862262,20862364-20862618,
           20862713-20862827,20862959-20863011,20863113-20863373,
           20863699-20863749,20863863-20864114,20864504-20864726,
           20865317-20865460
          Length = 799

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -2

Query: 154 YIRRNVPSREGWYSLSSVLTPLIDAWQMLKNIGWFS--SLNLKFNF 23
           Y RRN   +EGW SL S+L     +  +  N+G+FS  S+ L F+F
Sbjct: 290 YFRRN--KKEGWVSLGSILLCFTGSEALFANLGYFSIRSIQLSFSF 333


>03_05_0100 -
           20779387-20779641,20779824-20780629,20780757-20781011,
           20781107-20781221,20781301-20781353,20781517-20781777,
           20782804-20782854,20783081-20783329,20784765-20784990,
           20785968-20786132
          Length = 811

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -2

Query: 154 YIRRNVPSREGWYSLSSVLTPLIDAWQMLKNIGWFS--SLNLKFNF 23
           Y RRN   ++GW SLS +L        +  ++G+FS  S+ L F+F
Sbjct: 297 YFRRN--KKDGWISLSGILLCFTGTEALFSDLGYFSIRSIQLSFSF 340


>06_01_0757 +
           5659081-5659605,5659694-5659919,5659994-5660333,
           5660677-5661025,5661121-5661723
          Length = 680

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 193 FVFALTPSGEDYSYIRRNVPSREGWYS 113
           ++FAL   G D   I RN P+ +G YS
Sbjct: 536 YIFALEDGGHDSDTIARNSPTTDGTYS 562


>03_01_0392 + 3051469-3051876,3052414-3052832,3053992-3054061,
            3054923-3055016,3056587-3056907,3057298-3057403,
            3058807-3058887,3059336-3059402,3059715-3060239,
            3060328-3060553,3060628-3060967,3061311-3061659,
            3061755-3062357
          Length = 1202

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 193  FVFALTPSGEDYSYIRRNVPSREGWYS 113
            ++FAL   G D   I RN P+ +G YS
Sbjct: 1058 YIFALEDGGHDSDTIARNSPTTDGTYS 1084


>09_06_0327 +
           22359524-22359602,22359732-22359835,22362073-22362272,
           22362359-22362459,22362551-22363005,22363079-22363645
          Length = 501

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 369 TYVYAPYWGQEMMRELV*RAA*RRHSVSVLAIKPKEI 479
           TYV+    G+ M++E +   A RRH + V+  +P  I
Sbjct: 234 TYVFTKAMGEMMLQEQLVAGAGRRHGIPVVIARPSII 270


>03_05_0101 -
           20803546-20803800,20803907-20804700,20804788-20805042,
           20805143-20805263,20805716-20805768,20805979-20806239,
           20806734-20806784,20806900-20807148,20807257-20807479,
           20807737-20807910
          Length = 811

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 154 YIRRNVPSREGWYSLSSVLTPLIDAWQMLKNIGWFS--SLNLKFNFV 20
           Y RRN   ++GW  L  VL        +  ++G+FS  S+ L   FV
Sbjct: 299 YFRRN--KKDGWVQLGEVLLTFTGTEALFADLGYFSIKSIQLSSTFV 343


>03_04_0154 - 17749569-17749868
          Length = 99

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 458 RDKAKGNTGKDIEXXXXXXXARGKGFKVTREAVKRSKECGKCGCD 592
           R +A+G  G            RG+G    R   +R  ECG CGC+
Sbjct: 44  RQEAEGGGGAGAGEVEGRGGERGRG----RRRRRRRAECGTCGCE 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,644,724
Number of Sequences: 37544
Number of extensions: 314506
Number of successful extensions: 740
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)